Strain Fitness in Variovorax sp. SCN45 around GFF4367

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
290,115	+		GFF4366	0.33	+1.6
290,115	+		GFF4366	0.33	+0.0
290,116	-		GFF4366	0.33	+0.2
290,238	+		GFF4366	0.45	-0.1
290,268	+		GFF4366	0.48	+0.6
290,269	-		GFF4366	0.48	-0.6
290,498	-		GFF4366	0.72	-1.5
290,541	+		GFF4366	0.76	+0.6
291,288	-				+0.4
292,135	+		GFF4368	0.42	+0.7
292,136	-		GFF4368	0.42	-0.0
292,136	-		GFF4368	0.42	+1.0
292,136	-		GFF4368	0.42	+1.3
292,226	-		GFF4368	0.46	+0.9