Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4242 and GFF4243 are separated by 660 nucleotides GFF4243 and GFF4244 are separated by 15 nucleotides
GFF4242 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 155,898 to 156,944
GFF4242
GFF4243 - no description, at 157,605 to 157,730
GFF4243
GFF4244 - Acid phosphatase (EC 3.1.3.2), at 157,746 to 160,196
GFF4244
Position (kb) 157
158 Strain fitness (log2 ratio) -2
-1
0
1
2 at 156.649 kb on + strand, within GFF4242 at 156.770 kb on - strand, within GFF4242 at 156.829 kb on + strand, within GFF4242 at 156.829 kb on + strand, within GFF4242 at 156.830 kb on - strand, within GFF4242 at 156.830 kb on - strand, within GFF4242 at 156.830 kb on - strand, within GFF4242 at 156.830 kb on - strand, within GFF4242 at 156.934 kb on + strand at 156.935 kb on - strand at 156.935 kb on - strand at 156.935 kb on - strand at 156.935 kb on - strand at 156.935 kb on - strand at 156.944 kb on + strand at 156.944 kb on + strand at 156.944 kb on + strand at 156.944 kb on + strand at 156.944 kb on + strand at 156.945 kb on - strand at 156.945 kb on - strand at 156.945 kb on - strand at 156.974 kb on + strand at 156.974 kb on + strand at 156.974 kb on + strand at 156.974 kb on + strand at 156.974 kb on + strand at 156.974 kb on + strand at 156.974 kb on + strand at 156.975 kb on - strand at 156.975 kb on - strand at 156.975 kb on - strand at 156.975 kb on - strand at 156.985 kb on + strand at 156.985 kb on + strand at 156.986 kb on - strand at 156.986 kb on - strand at 156.986 kb on - strand at 156.986 kb on - strand at 157.037 kb on + strand at 157.037 kb on + strand at 157.037 kb on + strand at 157.038 kb on - strand at 157.038 kb on - strand at 157.038 kb on - strand at 157.315 kb on + strand at 157.407 kb on + strand at 157.407 kb on + strand at 157.408 kb on - strand at 157.408 kb on - strand at 157.413 kb on - strand at 157.414 kb on + strand at 157.479 kb on - strand at 157.493 kb on + strand at 157.504 kb on + strand at 157.505 kb on - strand at 157.505 kb on - strand at 157.505 kb on - strand at 157.505 kb on - strand at 157.509 kb on - strand at 157.516 kb on - strand at 157.539 kb on - strand at 157.723 kb on + strand at 157.724 kb on - strand at 157.724 kb on - strand at 157.741 kb on + strand at 157.741 kb on + strand at 157.742 kb on - strand at 157.742 kb on - strand at 157.742 kb on - strand at 157.742 kb on - strand at 157.742 kb on - strand at 157.743 kb on + strand at 157.743 kb on + strand at 157.744 kb on - strand at 157.744 kb on - strand at 157.744 kb on - strand at 157.744 kb on - strand at 157.745 kb on + strand at 157.745 kb on + strand at 157.745 kb on + strand at 157.745 kb on + strand at 157.745 kb on + strand at 157.745 kb on + strand at 157.745 kb on + strand at 157.746 kb on - strand at 157.746 kb on - strand at 157.746 kb on - strand at 157.746 kb on - strand at 157.746 kb on - strand at 157.746 kb on - strand at 157.746 kb on - strand at 157.775 kb on + strand at 157.775 kb on + strand at 157.775 kb on + strand at 157.775 kb on + strand at 157.776 kb on - strand at 157.776 kb on - strand at 157.776 kb on - strand at 157.950 kb on + strand at 157.950 kb on + strand at 157.950 kb on + strand at 157.950 kb on + strand at 157.951 kb on - strand at 157.951 kb on - strand at 157.951 kb on - strand at 157.953 kb on + strand at 157.953 kb on + strand at 157.953 kb on + strand at 157.953 kb on + strand at 157.954 kb on - strand at 157.954 kb on - strand at 157.954 kb on - strand at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.247 kb on + strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.248 kb on - strand, within GFF4244 at 158.364 kb on + strand, within GFF4244 at 158.364 kb on + strand, within GFF4244 at 158.365 kb on - strand, within GFF4244 at 158.365 kb on - strand, within GFF4244 at 158.376 kb on + strand, within GFF4244 at 158.377 kb on - strand, within GFF4244 at 158.377 kb on - strand, within GFF4244 at 158.377 kb on - strand, within GFF4244 at 158.403 kb on + strand, within GFF4244 at 158.403 kb on + strand, within GFF4244 at 158.404 kb on - strand, within GFF4244 at 158.409 kb on + strand, within GFF4244 at 158.409 kb on + strand, within GFF4244 at 158.409 kb on + strand, within GFF4244 at 158.409 kb on + strand, within GFF4244 at 158.409 kb on + strand, within GFF4244 at 158.410 kb on - strand, within GFF4244 at 158.410 kb on - strand, within GFF4244 at 158.410 kb on - strand, within GFF4244 at 158.619 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.700 kb on + strand, within GFF4244 at 158.701 kb on - strand, within GFF4244 at 158.701 kb on - strand, within GFF4244 at 158.701 kb on - strand, within GFF4244 at 158.701 kb on - strand, within GFF4244 at 158.701 kb on - strand, within GFF4244 at 158.701 kb on - strand, within GFF4244 at 158.715 kb on + strand, within GFF4244 at 158.716 kb on - strand, within GFF4244 at 158.716 kb on - strand, within GFF4244 at 158.716 kb on - strand, within GFF4244
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 156,649 + GFF4242 0.72 -0.6 156,770 - GFF4242 0.83 -0.4 156,829 + GFF4242 0.89 -0.2 156,829 + GFF4242 0.89 -0.2 156,830 - GFF4242 0.89 -1.1 156,830 - GFF4242 0.89 -0.1 156,830 - GFF4242 0.89 +0.2 156,830 - GFF4242 0.89 -0.3 156,934 + +0.7 156,935 - -0.7 156,935 - -0.1 156,935 - -1.1 156,935 - +0.1 156,935 - +0.8 156,944 + +0.0 156,944 + +0.0 156,944 + +0.1 156,944 + +0.3 156,944 + -1.2 156,945 - +0.8 156,945 - -0.0 156,945 - +1.6 156,974 + -1.4 156,974 + +1.3 156,974 + -0.3 156,974 + +0.3 156,974 + +0.0 156,974 + +0.6 156,974 + -0.4 156,975 - -0.7 156,975 - -1.1 156,975 - -0.4 156,975 - -0.7 156,985 + -0.2 156,985 + -0.1 156,986 - -0.5 156,986 - +1.2 156,986 - -0.4 156,986 - -0.4 157,037 + +0.3 157,037 + -0.1 157,037 + +0.9 157,038 - -0.7 157,038 - +0.1 157,038 - -0.6 157,315 + -0.2 157,407 + -0.1 157,407 + -0.6 157,408 - +0.5 157,408 - -1.0 157,413 - +1.3 157,414 + -0.1 157,479 - -0.1 157,493 + -0.8 157,504 + -1.8 157,505 - +1.3 157,505 - +0.5 157,505 - +0.4 157,505 - -0.8 157,509 - -0.9 157,516 - +0.6 157,539 - +0.6 157,723 + +1.6 157,724 - +0.5 157,724 - +0.6 157,741 + +0.8 157,741 + -0.8 157,742 - -1.0 157,742 - -0.8 157,742 - +0.2 157,742 - -1.1 157,742 - -0.4 157,743 + -0.5 157,743 + -0.2 157,744 - +0.0 157,744 - -1.3 157,744 - +0.4 157,744 - -1.3 157,745 + -1.1 157,745 + -0.4 157,745 + +0.1 157,745 + +0.2 157,745 + -0.9 157,745 + -0.6 157,745 + -0.4 157,746 - +0.3 157,746 - +0.4 157,746 - -1.4 157,746 - -0.9 157,746 - -1.2 157,746 - +0.0 157,746 - -0.3 157,775 + -0.4 157,775 + +1.6 157,775 + -0.4 157,775 + +2.6 157,776 - +0.7 157,776 - +0.1 157,776 - -0.3 157,950 + +0.2 157,950 + +0.5 157,950 + +0.0 157,950 + +0.4 157,951 - +0.3 157,951 - -1.4 157,951 - +1.1 157,953 + -1.2 157,953 + -0.1 157,953 + +0.1 157,953 + -0.5 157,954 - -0.1 157,954 - +0.0 157,954 - -1.0 158,247 + GFF4244 0.20 +0.0 158,247 + GFF4244 0.20 -0.4 158,247 + GFF4244 0.20 -1.0 158,247 + GFF4244 0.20 +1.0 158,247 + GFF4244 0.20 +0.2 158,247 + GFF4244 0.20 +1.3 158,247 + GFF4244 0.20 +0.3 158,247 + GFF4244 0.20 -0.1 158,247 + GFF4244 0.20 -0.1 158,247 + GFF4244 0.20 +1.0 158,248 - GFF4244 0.20 -1.2 158,248 - GFF4244 0.20 -0.2 158,248 - GFF4244 0.20 +1.1 158,248 - GFF4244 0.20 +0.1 158,248 - GFF4244 0.20 -0.1 158,248 - GFF4244 0.20 -0.8 158,248 - GFF4244 0.20 -0.2 158,248 - GFF4244 0.20 -0.1 158,248 - GFF4244 0.20 +0.2 158,364 + GFF4244 0.25 +0.6 158,364 + GFF4244 0.25 +0.5 158,365 - GFF4244 0.25 +1.0 158,365 - GFF4244 0.25 -0.9 158,376 + GFF4244 0.26 +1.4 158,377 - GFF4244 0.26 +1.8 158,377 - GFF4244 0.26 +1.0 158,377 - GFF4244 0.26 -1.0 158,403 + GFF4244 0.27 +2.0 158,403 + GFF4244 0.27 -0.2 158,404 - GFF4244 0.27 +0.5 158,409 + GFF4244 0.27 -0.1 158,409 + GFF4244 0.27 +1.1 158,409 + GFF4244 0.27 -0.6 158,409 + GFF4244 0.27 +0.2 158,409 + GFF4244 0.27 +1.1 158,410 - GFF4244 0.27 +0.3 158,410 - GFF4244 0.27 -1.3 158,410 - GFF4244 0.27 -0.3 158,619 + GFF4244 0.36 -0.2 158,700 + GFF4244 0.39 -0.3 158,700 + GFF4244 0.39 +1.2 158,700 + GFF4244 0.39 -0.4 158,700 + GFF4244 0.39 +0.2 158,700 + GFF4244 0.39 -0.2 158,700 + GFF4244 0.39 -0.7 158,700 + GFF4244 0.39 +0.5 158,700 + GFF4244 0.39 +0.0 158,700 + GFF4244 0.39 -0.5 158,700 + GFF4244 0.39 +1.2 158,701 - GFF4244 0.39 +0.0 158,701 - GFF4244 0.39 -0.7 158,701 - GFF4244 0.39 -0.4 158,701 - GFF4244 0.39 +0.6 158,701 - GFF4244 0.39 +0.2 158,701 - GFF4244 0.39 -0.9 158,715 + GFF4244 0.40 +2.0 158,716 - GFF4244 0.40 -0.3 158,716 - GFF4244 0.40 -0.6 158,716 - GFF4244 0.40 +0.9
Or see this region's nucleotide sequence