Strain Fitness in Variovorax sp. SCN45 around GFF4236

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
145,906	+				+0.1
145,906	+				-1.0
145,907	-				-0.2
145,907	-				-0.8
145,907	-				+0.2
145,907	-				+0.3
146,075	-		GFF4235	0.28	+0.9
147,087	+		GFF4236	0.45	+0.9
147,823	-		GFF4237	0.18	+0.0
147,823	-		GFF4237	0.18	-0.6
147,954	+		GFF4237	0.30	+0.6
147,954	+		GFF4237	0.30	-0.0
147,955	-		GFF4237	0.30	-0.4
148,248	+		GFF4237	0.57	+0.2
148,422	+		GFF4237	0.72	+0.5