Strain Fitness in Variovorax sp. SCN45 around GFF4110

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
12,230	-		GFF4109	0.26	+0.4
12,230	-		GFF4109	0.26	-0.2
12,404	-		GFF4109	0.40	+0.4
12,404	-		GFF4109	0.40	-0.1
12,584	-		GFF4109	0.54	-0.2
12,884	-		GFF4109	0.79	+0.3
14,409	-		GFF4111	0.41	-0.2
14,579	+		GFF4111	0.61	+0.1
14,579	+		GFF4111	0.61	-0.4
14,580	-		GFF4111	0.61	+0.2