Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4033 and GFF4034 are separated by 42 nucleotides GFF4034 and GFF4035 are separated by 94 nucleotides GFF4035 and GFF4036 are separated by 380 nucleotides GFF4036 and GFF4037 overlap by 4 nucleotides
GFF4033 - no description, at 242,558 to 242,797
GFF4033
GFF4034 - Cobalt/zinc/cadmium resistance protein CzcD, at 242,840 to 243,655
GFF4034
GFF4035 - no description, at 243,750 to 243,875
GFF4035
GFF4036 - hypothetical protein, at 244,256 to 244,594
GFF4036
GFF4037 - CzcABC family efflux RND transporter, transmembrane protein, at 244,591 to 247,716
GFF4037
Position (kb) 243
244 Strain fitness (log2 ratio) -2
-1
0
1 at 242.821 kb on - strand at 242.961 kb on - strand, within GFF4034 at 242.982 kb on - strand, within GFF4034 at 243.016 kb on + strand, within GFF4034 at 243.121 kb on + strand, within GFF4034 at 243.122 kb on - strand, within GFF4034 at 243.215 kb on - strand, within GFF4034 at 243.242 kb on + strand, within GFF4034 at 243.243 kb on - strand, within GFF4034 at 243.438 kb on + strand, within GFF4034 at 243.438 kb on + strand, within GFF4034 at 243.438 kb on + strand, within GFF4034 at 243.438 kb on + strand, within GFF4034 at 243.438 kb on + strand, within GFF4034 at 243.438 kb on + strand, within GFF4034 at 243.439 kb on - strand, within GFF4034 at 243.502 kb on - strand, within GFF4034 at 243.524 kb on + strand, within GFF4034 at 243.589 kb on + strand at 243.589 kb on + strand at 243.722 kb on + strand at 243.723 kb on - strand at 243.723 kb on - strand at 243.723 kb on - strand at 243.953 kb on + strand at 244.293 kb on + strand, within GFF4036 at 244.293 kb on + strand, within GFF4036 at 244.294 kb on - strand, within GFF4036 at 244.322 kb on - strand, within GFF4036 at 244.392 kb on + strand, within GFF4036 at 244.392 kb on + strand, within GFF4036 at 244.665 kb on - strand at 244.665 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 242,821 - -0.3 242,961 - GFF4034 0.15 +0.6 242,982 - GFF4034 0.17 +1.2 243,016 + GFF4034 0.22 -0.2 243,121 + GFF4034 0.34 -0.4 243,122 - GFF4034 0.35 -0.1 243,215 - GFF4034 0.46 +0.3 243,242 + GFF4034 0.49 +0.0 243,243 - GFF4034 0.49 -0.0 243,438 + GFF4034 0.73 -0.4 243,438 + GFF4034 0.73 +0.0 243,438 + GFF4034 0.73 -0.4 243,438 + GFF4034 0.73 -0.5 243,438 + GFF4034 0.73 -0.2 243,438 + GFF4034 0.73 +0.1 243,439 - GFF4034 0.73 -1.1 243,502 - GFF4034 0.81 -0.2 243,524 + GFF4034 0.84 +0.4 243,589 + -0.6 243,589 + +0.4 243,722 + -0.2 243,723 - +0.4 243,723 - +0.5 243,723 - +0.1 243,953 + -1.8 244,293 + GFF4036 0.11 -0.7 244,293 + GFF4036 0.11 -0.1 244,294 - GFF4036 0.11 +0.3 244,322 - GFF4036 0.19 -1.8 244,392 + GFF4036 0.40 +0.3 244,392 + GFF4036 0.40 +0.3 244,665 - -0.4 244,665 - +0.0
Or see this region's nucleotide sequence