Strain Fitness in Variovorax sp. SCN45 around GFF4031

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
239,319	+				+0.1
239,319	+				-0.1
239,552	-				-1.5
239,552	-				-0.6
239,689	+				+0.1
239,732	+				-0.8
239,848	-				-0.3
239,894	-				+0.4
239,938	+				+1.1
239,938	+				-0.1
239,938	+				-0.4
239,938	+				+0.1
239,939	-				-1.0
239,939	-				-1.0
240,033	+				+0.2
240,565	+				-0.1
240,566	-				+0.7
240,566	-				-0.2
240,566	-				+0.2
240,633	+				-0.8
240,634	-				-2.3
240,634	-				+0.0
240,634	-				-0.8
240,646	-				-0.0
240,663	+				-2.0
240,666	-				-0.6
240,717	-				-0.4
240,820	-		GFF4032	0.13	-0.5
240,881	+		GFF4032	0.16	+0.1