Strain Fitness in Variovorax sp. SCN45 around GFF3898

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
101,711	+				+0.9
101,712	-				-0.7
101,772	+				-0.0
101,773	+				+0.4
101,773	+				+0.1
101,774	-				-1.0
101,784	+				-0.9
101,784	+				-0.0
101,785	-				+0.3
101,785	-				-1.0
101,785	-				-0.4
101,869	+				+0.4
101,870	-				+0.9
101,890	+				+0.4
101,890	+				+0.3
101,926	+		GFF3900	0.10	-0.3
101,926	+		GFF3900	0.10	-1.7
101,926	+		GFF3900	0.10	+0.5
101,926	+		GFF3900	0.10	-0.7
101,926	+		GFF3900	0.10	-1.5
101,926	+		GFF3900	0.10	+1.1
101,926	+		GFF3900	0.10	-0.3
101,926	+		GFF3900	0.10	-0.1
101,927	-		GFF3900	0.10	-0.8
101,927	-		GFF3900	0.10	-1.9
101,927	-		GFF3900	0.10	+0.7
101,927	-		GFF3900	0.10	-1.3
101,927	-		GFF3900	0.10	+0.1
101,927	-		GFF3900	0.10	+0.3
102,073	+		GFF3900	0.29	+0.2
102,073	+		GFF3900	0.29	+2.0
102,073	+		GFF3900	0.29	+0.5
102,073	+		GFF3900	0.29	-0.0
102,073	+		GFF3900	0.29	-1.6
102,073	+		GFF3900	0.29	-0.6
102,073	+		GFF3900	0.29	-2.7
102,073	+		GFF3900	0.29	+0.1