Strain Fitness in Variovorax sp. SCN45 around GFF3896

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
97,331	-		GFF3894	0.57	-1.6
97,610	-		GFF3894	0.78	-0.8
98,247	-				+0.4
98,265	+				-0.8
98,266	-				-1.9
98,266	-				-0.6
98,266	-				-0.1
98,266	-				+1.3
98,266	-				+0.4
98,266	-				+0.8
98,969	-				-0.3
98,969	-				+0.3
98,969	-				+0.5
98,969	-				+2.1
98,969	-				-0.3
98,984	-				+0.4