Strain Fitness in Variovorax sp. SCN45 around GFF3884

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
81,950	+				-0.5
81,950	+				+1.0
81,950	+				-0.2
81,950	+				-0.8
81,950	+				+1.0
81,950	+				-0.3
81,950	+				+0.7
81,950	+				+0.5
81,950	+				-0.6
81,950	+				+0.0
81,951	-				-0.5
81,951	-				+1.2
81,951	-				-0.4
81,951	-				+0.1
81,951	-				+0.4
81,951	-				-0.3
81,951	-				-0.1
81,951	-				+0.6
81,951	-				+0.3
81,951	-				+0.6
81,951	-				-0.1
81,951	-				-0.4
81,951	-				+1.5
81,951	-				+0.3
81,951	-				+2.5
81,951	-				+0.8
81,951	-				-0.1
82,007	+				-0.1
82,008	-				+0.1
82,025	+		GFF3885	0.11	-2.4
82,025	+		GFF3885	0.11	-0.3
82,415	+		GFF3885	0.59	+0.5
82,415	+		GFF3885	0.59	-0.2
82,415	+		GFF3885	0.59	+0.5
82,415	+		GFF3885	0.59	-2.4
82,415	+		GFF3885	0.59	-0.2
82,415	+		GFF3885	0.59	-0.5
82,416	-		GFF3885	0.59	-1.0
82,416	-		GFF3885	0.59	-0.8
82,416	-		GFF3885	0.59	-0.1
82,416	-		GFF3885	0.59	-0.3
82,416	-		GFF3885	0.59	-0.5
82,416	-		GFF3885	0.59	-0.1
82,416	-		GFF3885	0.59	-0.3
82,416	-		GFF3885	0.59	-0.6
82,416	-		GFF3885	0.59	-0.4
82,416	-		GFF3885	0.59	-1.1
82,416	-		GFF3885	0.59	+0.5
82,421	+		GFF3885	0.60	-0.2
82,421	+		GFF3885	0.60	-0.2
82,421	+		GFF3885	0.60	-0.5
82,422	-		GFF3885	0.60	-0.9
82,422	-		GFF3885	0.60	-0.4
82,706	+				-0.8
82,706	+				+0.4
82,707	-				+0.3
82,707	-				-1.3
82,707	-				-0.3
82,707	-				-0.0
82,707	-				-0.2
82,721	+				+1.1
82,722	-				-0.3
82,722	-				+0.3
82,732	+				-0.0
82,733	-				+0.9
82,733	-				+0.2
82,733	-				-0.1
82,733	-				-0.3