Strain Fitness in Variovorax sp. SCN45 around GFF3882

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
78,060	+				-0.5
78,061	-				-1.3
78,065	+				-0.3
78,065	+				+0.0
78,065	+				-0.1
78,065	+				-0.7
78,065	+				-0.4
78,066	-				+1.0
78,066	-				-0.4
78,066	-				-0.8
78,066	-				-0.2
78,066	-				+0.2
78,066	-				+0.4
78,066	-				+1.0
79,357	+		GFF3882	0.36	-1.9
79,941	+				-0.7
79,941	+				+1.3
79,942	-				-0.5
79,942	-				+0.3