Strain Fitness in Variovorax sp. SCN45 around GFF388

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 419,865 to 422,710
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500 ntGFF387 and GFF388 overlap by 4 nucleotidesGFF388 and GFF389 are separated by 19 nucleotidesGFF389 and GFF390 are separated by 8 nucleotides GFF387 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267), at 419,681 to 420,868 GFF387 GFF388 - Phosphatidate cytidylyltransferase (EC 2.7.7.41), at 420,865 to 421,710 GFF388 GFF389 - Undecaprenyl diphosphate synthase (EC 2.5.1.31), at 421,730 to 422,458 GFF389 GFF390 - Ribosome recycling factor, at 422,467 to 423,027 GFF390