Strain Fitness in Variovorax sp. SCN45 around GFF3857

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
55,768	+				+0.7
55,768	+				+0.1
55,779	+				+1.2
55,795	+				-0.8
55,795	+				+0.5
55,795	+				+0.4
55,795	+				-0.2
55,795	+				+0.2
55,795	+				-0.7
55,795	+				+0.4
55,795	+				+1.0
55,795	+				+0.4
55,795	+				-1.8
55,795	+				+0.0
55,795	+				+0.9
55,795	+				-0.2
55,795	+				-1.8
55,946	-		GFF3857	0.19	+1.1
56,128	+		GFF3857	0.38	+1.0
56,128	+		GFF3857	0.38	-1.0
56,723	+				+0.1
56,724	-				+0.4
56,734	+				-0.5
56,734	+				-0.5
56,784	+				-0.4
56,784	+				-1.6
56,784	+				-0.2
56,784	+				-1.2
56,784	+				+0.6
56,784	+				-0.0