Strain Fitness in Variovorax sp. SCN45 around GFF3699

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
199,905	+		GFF3698	0.68	-0.7
199,905	+		GFF3698	0.68	+0.4
199,906	-		GFF3698	0.68	-0.1
199,942	+		GFF3698	0.69	-0.8
199,942	+		GFF3698	0.69	-0.8
199,942	+		GFF3698	0.69	+0.2
199,942	+		GFF3698	0.69	-0.1
200,136	+		GFF3698	0.76	+1.6
200,412	+		GFF3698	0.86	-0.2
200,413	-		GFF3698	0.86	+0.8
200,413	-		GFF3698	0.86	+0.0
201,483	+		GFF3700	0.24	-1.3
202,152	+				-0.2
202,152	+				+0.3
202,152	+				-0.3
202,153	-				-0.8
202,153	-				-0.2
202,153	-				+0.5