Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3667 and GFF3668 are separated by 19 nucleotides GFF3668 and GFF3669 are separated by 149 nucleotides GFF3669 and GFF3670 overlap by 16 nucleotides
GFF3667 - Uncharacterized MFS-type transporter, at 168,101 to 169,369
GFF3667
GFF3668 - hypothetical protein, at 169,389 to 170,174
GFF3668
GFF3669 - Two-component system response regulator protein, at 170,324 to 171,694
GFF3669
GFF3670 - Two-component system sensor histidine kinase, at 171,679 to 173,139
GFF3670
Position (kb) 170
171
172 Strain fitness (log2 ratio) -2
-1
0
1
2 at 169.633 kb on + strand, within GFF3668 at 169.633 kb on + strand, within GFF3668 at 169.633 kb on + strand, within GFF3668 at 169.633 kb on + strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.634 kb on - strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.714 kb on + strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 169.715 kb on - strand, within GFF3668 at 170.337 kb on + strand at 170.338 kb on - strand at 170.338 kb on - strand at 170.355 kb on + strand at 170.356 kb on - strand at 170.799 kb on + strand, within GFF3669 at 171.171 kb on + strand, within GFF3669 at 172.398 kb on - strand, within GFF3670 at 172.398 kb on - strand, within GFF3670
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 169,633 + GFF3668 0.31 +0.9 169,633 + GFF3668 0.31 +1.0 169,633 + GFF3668 0.31 -0.2 169,633 + GFF3668 0.31 -0.2 169,634 - GFF3668 0.31 -0.4 169,634 - GFF3668 0.31 -1.0 169,634 - GFF3668 0.31 +1.4 169,634 - GFF3668 0.31 -0.5 169,634 - GFF3668 0.31 -1.1 169,634 - GFF3668 0.31 +1.8 169,634 - GFF3668 0.31 -1.0 169,714 + GFF3668 0.41 +1.7 169,714 + GFF3668 0.41 -0.5 169,714 + GFF3668 0.41 -0.7 169,714 + GFF3668 0.41 -1.5 169,714 + GFF3668 0.41 -0.9 169,714 + GFF3668 0.41 -0.6 169,714 + GFF3668 0.41 -1.5 169,714 + GFF3668 0.41 -1.2 169,715 - GFF3668 0.41 +0.5 169,715 - GFF3668 0.41 -0.4 169,715 - GFF3668 0.41 -0.5 169,715 - GFF3668 0.41 -1.0 169,715 - GFF3668 0.41 +0.1 169,715 - GFF3668 0.41 -0.9 169,715 - GFF3668 0.41 -2.3 169,715 - GFF3668 0.41 +0.4 169,715 - GFF3668 0.41 +0.5 170,337 + +0.1 170,338 - +0.4 170,338 - +0.7 170,355 + -0.2 170,356 - +0.5 170,799 + GFF3669 0.35 +0.8 171,171 + GFF3669 0.62 +1.2 172,398 - GFF3670 0.49 +0.1 172,398 - GFF3670 0.49 -0.6
Or see this region's nucleotide sequence