Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3633 and GFF3634 are separated by 11 nucleotides GFF3634 and GFF3635 are separated by 224 nucleotides GFF3635 and GFF3636 overlap by 1 nucleotides GFF3636 and GFF3637 overlap by 4 nucleotides GFF3637 and GFF3638 are separated by 2 nucleotides
GFF3633 - hypothetical protein, at 144,421 to 146,025
GFF3633
GFF3634 - hypothetical protein, at 146,037 to 146,561
GFF3634
GFF3635 - LSU ribosomal protein L3p (L3e), at 146,786 to 147,466
GFF3635
GFF3636 - LSU ribosomal protein L4p (L1e), at 147,466 to 148,086
GFF3636
GFF3637 - LSU ribosomal protein L23p (L23Ae), at 148,083 to 148,418
GFF3637
GFF3638 - LSU ribosomal protein L2p (L8e), at 148,421 to 149,245
GFF3638
Position (kb) 146
147
148 Strain fitness (log2 ratio) -2
-1
0
1
2 at 145.797 kb on + strand, within GFF3633 at 145.797 kb on + strand, within GFF3633 at 145.797 kb on + strand, within GFF3633 at 145.798 kb on - strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.804 kb on + strand, within GFF3633 at 145.805 kb on - strand, within GFF3633 at 145.805 kb on - strand, within GFF3633 at 145.808 kb on + strand, within GFF3633 at 145.837 kb on + strand, within GFF3633 at 145.837 kb on + strand, within GFF3633 at 145.837 kb on + strand, within GFF3633 at 145.837 kb on + strand, within GFF3633 at 145.837 kb on + strand, within GFF3633 at 145.837 kb on + strand, within GFF3633 at 145.838 kb on - strand, within GFF3633 at 145.838 kb on - strand, within GFF3633 at 145.838 kb on - strand, within GFF3633 at 145.914 kb on + strand at 145.914 kb on + strand at 145.914 kb on + strand at 145.942 kb on + strand at 145.942 kb on + strand at 145.942 kb on + strand at 145.942 kb on + strand at 145.942 kb on + strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 145.943 kb on - strand at 146.023 kb on + strand at 146.023 kb on + strand at 146.023 kb on + strand at 146.023 kb on + strand at 146.024 kb on - strand at 146.024 kb on - strand at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.208 kb on + strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.209 kb on - strand, within GFF3634 at 146.393 kb on + strand, within GFF3634 at 146.393 kb on + strand, within GFF3634 at 146.394 kb on - strand, within GFF3634 at 146.394 kb on - strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.412 kb on + strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.413 kb on - strand, within GFF3634 at 146.513 kb on + strand at 146.513 kb on + strand at 146.513 kb on + strand at 146.513 kb on + strand at 146.513 kb on + strand at 146.513 kb on + strand at 146.513 kb on + strand at 146.513 kb on + strand at 146.514 kb on - strand at 146.559 kb on + strand at 146.560 kb on - strand at 146.560 kb on - strand at 146.560 kb on - strand at 146.560 kb on - strand at 146.634 kb on + strand at 146.634 kb on + strand at 146.634 kb on + strand at 146.635 kb on - strand at 146.706 kb on + strand at 146.706 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 145,797 + GFF3633 0.86 -0.9 145,797 + GFF3633 0.86 +0.8 145,797 + GFF3633 0.86 -0.0 145,798 - GFF3633 0.86 +1.3 145,804 + GFF3633 0.86 -0.7 145,804 + GFF3633 0.86 -0.1 145,804 + GFF3633 0.86 +0.9 145,804 + GFF3633 0.86 +0.9 145,804 + GFF3633 0.86 +0.7 145,804 + GFF3633 0.86 +1.8 145,804 + GFF3633 0.86 +0.6 145,804 + GFF3633 0.86 -0.2 145,805 - GFF3633 0.86 -0.0 145,805 - GFF3633 0.86 +0.4 145,808 + GFF3633 0.86 -1.0 145,837 + GFF3633 0.88 +0.8 145,837 + GFF3633 0.88 -0.8 145,837 + GFF3633 0.88 -0.0 145,837 + GFF3633 0.88 +0.1 145,837 + GFF3633 0.88 -0.3 145,837 + GFF3633 0.88 +0.3 145,838 - GFF3633 0.88 -0.1 145,838 - GFF3633 0.88 -0.2 145,838 - GFF3633 0.88 -1.2 145,914 + -0.3 145,914 + -0.1 145,914 + +0.3 145,942 + +0.2 145,942 + +0.2 145,942 + +0.2 145,942 + +0.4 145,942 + +1.2 145,943 - -0.0 145,943 - +0.1 145,943 - -0.2 145,943 - -1.2 145,943 - -1.2 145,943 - -0.4 145,943 - -2.2 145,943 - -1.8 145,943 - -0.2 145,943 - -0.8 145,943 - -0.0 145,943 - +1.0 145,943 - -1.9 145,943 - -0.7 145,943 - -2.0 145,943 - +0.8 145,943 - -0.0 146,023 + +0.8 146,023 + -0.2 146,023 + +0.8 146,023 + +0.2 146,024 - -0.3 146,024 - -0.4 146,208 + GFF3634 0.33 +0.2 146,208 + GFF3634 0.33 +0.2 146,208 + GFF3634 0.33 -0.3 146,208 + GFF3634 0.33 -0.0 146,208 + GFF3634 0.33 +0.1 146,208 + GFF3634 0.33 +0.5 146,208 + GFF3634 0.33 +1.3 146,208 + GFF3634 0.33 -1.9 146,209 - GFF3634 0.33 -0.2 146,209 - GFF3634 0.33 +0.2 146,209 - GFF3634 0.33 +0.0 146,209 - GFF3634 0.33 -0.9 146,209 - GFF3634 0.33 +0.6 146,209 - GFF3634 0.33 +0.2 146,209 - GFF3634 0.33 -1.7 146,393 + GFF3634 0.68 -0.2 146,393 + GFF3634 0.68 -0.5 146,394 - GFF3634 0.68 -0.1 146,394 - GFF3634 0.68 -0.6 146,412 + GFF3634 0.71 +0.5 146,412 + GFF3634 0.71 -0.3 146,412 + GFF3634 0.71 +0.2 146,412 + GFF3634 0.71 -0.3 146,412 + GFF3634 0.71 +0.5 146,412 + GFF3634 0.71 +0.2 146,412 + GFF3634 0.71 +0.1 146,412 + GFF3634 0.71 -0.2 146,413 - GFF3634 0.72 +0.1 146,413 - GFF3634 0.72 -0.0 146,413 - GFF3634 0.72 +0.1 146,413 - GFF3634 0.72 +0.3 146,413 - GFF3634 0.72 -0.2 146,413 - GFF3634 0.72 -0.3 146,413 - GFF3634 0.72 +0.2 146,413 - GFF3634 0.72 +0.6 146,413 - GFF3634 0.72 -0.2 146,413 - GFF3634 0.72 -0.3 146,513 + -0.0 146,513 + +0.9 146,513 + +0.5 146,513 + -0.5 146,513 + -0.1 146,513 + +0.8 146,513 + +0.2 146,513 + +0.0 146,514 - +0.2 146,559 + +0.5 146,560 - +1.2 146,560 - -1.2 146,560 - -1.2 146,560 - -1.4 146,634 + +1.0 146,634 + -1.8 146,634 + -0.1 146,635 - +1.5 146,706 + -1.0 146,706 + -0.8
Or see this region's nucleotide sequence