Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3630 and GFF3631 are separated by 142 nucleotides GFF3631 and GFF3632 are separated by 21 nucleotides GFF3632 and GFF3633 are separated by 146 nucleotides
GFF3630 - Translation elongation factor G, at 140,503 to 142,602
GFF3630
GFF3631 - Translation elongation factor Tu, at 142,745 to 143,938
GFF3631
GFF3632 - SSU ribosomal protein S10p (S20e), at 143,960 to 144,274
GFF3632
GFF3633 - hypothetical protein, at 144,421 to 146,025
GFF3633
Position (kb) 142
143
144 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 142.600 kb on + strand at 142.600 kb on + strand at 144.272 kb on + strand at 144.273 kb on - strand at 144.300 kb on + strand at 144.300 kb on + strand at 144.300 kb on + strand at 144.300 kb on + strand at 144.300 kb on + strand at 144.301 kb on - strand at 144.301 kb on - strand at 144.301 kb on - strand at 144.301 kb on - strand at 144.301 kb on - strand at 144.301 kb on - strand at 144.353 kb on + strand at 144.353 kb on + strand at 144.353 kb on + strand at 144.353 kb on + strand at 144.353 kb on + strand at 144.353 kb on + strand at 144.353 kb on + strand at 144.354 kb on - strand at 144.354 kb on - strand at 144.354 kb on - strand at 144.354 kb on - strand at 144.385 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.420 kb on + strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.421 kb on - strand at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.583 kb on + strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.584 kb on - strand, within GFF3633 at 144.585 kb on - strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.619 kb on + strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.620 kb on - strand, within GFF3633 at 144.644 kb on + strand, within GFF3633 at 144.644 kb on + strand, within GFF3633 at 144.644 kb on + strand, within GFF3633 at 144.645 kb on - strand, within GFF3633 at 144.724 kb on + strand, within GFF3633 at 144.725 kb on - strand, within GFF3633 at 144.725 kb on - strand, within GFF3633 at 144.725 kb on - strand, within GFF3633 at 144.725 kb on - strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.847 kb on + strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.848 kb on - strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.934 kb on + strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633 at 144.935 kb on - strand, within GFF3633
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 142,600 + -0.4 142,600 + -0.4 144,272 + -0.4 144,273 - +0.9 144,300 + -0.2 144,300 + -0.3 144,300 + -1.4 144,300 + +0.0 144,300 + +0.5 144,301 - -1.3 144,301 - +0.5 144,301 - -0.8 144,301 - -0.4 144,301 - -0.4 144,301 - -0.7 144,353 + +0.3 144,353 + -1.1 144,353 + +0.2 144,353 + +0.2 144,353 + -0.4 144,353 + -0.8 144,353 + -0.1 144,354 - -3.1 144,354 - +0.2 144,354 - -0.8 144,354 - +1.0 144,385 + +0.2 144,420 + -0.1 144,420 + -0.2 144,420 + -0.1 144,420 + +0.8 144,420 + -2.5 144,420 + -0.5 144,420 + -0.8 144,420 + +0.8 144,420 + -1.0 144,420 + -0.2 144,420 + +0.2 144,420 + -0.2 144,420 + +0.3 144,420 + -0.2 144,420 + -2.0 144,420 + +0.6 144,420 + -0.7 144,420 + +1.0 144,420 + +1.3 144,420 + -1.5 144,420 + +0.0 144,420 + -0.2 144,420 + -0.3 144,420 + +0.6 144,420 + +0.2 144,420 + -1.2 144,421 - +0.4 144,421 - +0.1 144,421 - +0.2 144,421 - +1.1 144,421 - +0.8 144,421 - +0.4 144,421 - -0.1 144,421 - -0.8 144,421 - -0.0 144,421 - -1.2 144,421 - +0.1 144,421 - +0.9 144,421 - +0.0 144,421 - -0.1 144,421 - -0.3 144,421 - -0.9 144,421 - -0.5 144,421 - -0.3 144,421 - +0.2 144,421 - -0.4 144,421 - +0.6 144,421 - +0.2 144,421 - -0.5 144,421 - -0.1 144,421 - -0.4 144,583 + GFF3633 0.10 -0.2 144,583 + GFF3633 0.10 -2.7 144,583 + GFF3633 0.10 -0.7 144,583 + GFF3633 0.10 -0.7 144,583 + GFF3633 0.10 +1.0 144,583 + GFF3633 0.10 +0.2 144,583 + GFF3633 0.10 +0.3 144,583 + GFF3633 0.10 +0.2 144,583 + GFF3633 0.10 +0.2 144,584 - GFF3633 0.10 -1.8 144,584 - GFF3633 0.10 +1.3 144,584 - GFF3633 0.10 +0.1 144,584 - GFF3633 0.10 -0.7 144,584 - GFF3633 0.10 +0.6 144,584 - GFF3633 0.10 +0.2 144,584 - GFF3633 0.10 +0.2 144,584 - GFF3633 0.10 -0.5 144,584 - GFF3633 0.10 -1.8 144,584 - GFF3633 0.10 +0.3 144,584 - GFF3633 0.10 +0.1 144,584 - GFF3633 0.10 +2.5 144,584 - GFF3633 0.10 -2.2 144,584 - GFF3633 0.10 +1.5 144,584 - GFF3633 0.10 +0.2 144,584 - GFF3633 0.10 +0.5 144,585 - GFF3633 0.10 +0.0 144,619 + GFF3633 0.12 +0.6 144,619 + GFF3633 0.12 -0.3 144,619 + GFF3633 0.12 -1.1 144,619 + GFF3633 0.12 -0.1 144,619 + GFF3633 0.12 -1.1 144,619 + GFF3633 0.12 -0.2 144,619 + GFF3633 0.12 -0.5 144,619 + GFF3633 0.12 -0.3 144,619 + GFF3633 0.12 +1.0 144,619 + GFF3633 0.12 +0.4 144,619 + GFF3633 0.12 +0.2 144,619 + GFF3633 0.12 -1.0 144,619 + GFF3633 0.12 +1.2 144,619 + GFF3633 0.12 +0.3 144,620 - GFF3633 0.12 -0.2 144,620 - GFF3633 0.12 +0.2 144,620 - GFF3633 0.12 +1.8 144,620 - GFF3633 0.12 +1.0 144,620 - GFF3633 0.12 -0.9 144,620 - GFF3633 0.12 +0.8 144,620 - GFF3633 0.12 +1.1 144,620 - GFF3633 0.12 -0.1 144,620 - GFF3633 0.12 +0.4 144,620 - GFF3633 0.12 -1.2 144,620 - GFF3633 0.12 +0.8 144,620 - GFF3633 0.12 -1.0 144,620 - GFF3633 0.12 +1.0 144,620 - GFF3633 0.12 -0.9 144,620 - GFF3633 0.12 +0.0 144,644 + GFF3633 0.14 -0.7 144,644 + GFF3633 0.14 -0.2 144,644 + GFF3633 0.14 -0.9 144,645 - GFF3633 0.14 -0.2 144,724 + GFF3633 0.19 +2.8 144,725 - GFF3633 0.19 +0.1 144,725 - GFF3633 0.19 +0.4 144,725 - GFF3633 0.19 -0.7 144,725 - GFF3633 0.19 +0.5 144,847 + GFF3633 0.27 -0.9 144,847 + GFF3633 0.27 -0.5 144,847 + GFF3633 0.27 +0.0 144,847 + GFF3633 0.27 -0.4 144,847 + GFF3633 0.27 -0.5 144,847 + GFF3633 0.27 +0.6 144,847 + GFF3633 0.27 -0.3 144,847 + GFF3633 0.27 -0.2 144,847 + GFF3633 0.27 +0.9 144,847 + GFF3633 0.27 -0.0 144,847 + GFF3633 0.27 -0.1 144,847 + GFF3633 0.27 -0.3 144,848 - GFF3633 0.27 +0.6 144,848 - GFF3633 0.27 +0.7 144,848 - GFF3633 0.27 +0.1 144,848 - GFF3633 0.27 +0.5 144,848 - GFF3633 0.27 -0.1 144,848 - GFF3633 0.27 -0.3 144,848 - GFF3633 0.27 -0.1 144,848 - GFF3633 0.27 -0.2 144,848 - GFF3633 0.27 -0.0 144,848 - GFF3633 0.27 +0.5 144,848 - GFF3633 0.27 +1.0 144,848 - GFF3633 0.27 -1.4 144,848 - GFF3633 0.27 +0.8 144,848 - GFF3633 0.27 +0.8 144,848 - GFF3633 0.27 -0.2 144,848 - GFF3633 0.27 +0.6 144,934 + GFF3633 0.32 -0.4 144,934 + GFF3633 0.32 +0.0 144,934 + GFF3633 0.32 -0.1 144,934 + GFF3633 0.32 -0.5 144,934 + GFF3633 0.32 -0.3 144,934 + GFF3633 0.32 -0.3 144,934 + GFF3633 0.32 -0.2 144,934 + GFF3633 0.32 +1.0 144,934 + GFF3633 0.32 +0.8 144,934 + GFF3633 0.32 -0.2 144,934 + GFF3633 0.32 -0.1 144,934 + GFF3633 0.32 -0.5 144,934 + GFF3633 0.32 -0.2 144,934 + GFF3633 0.32 -0.5 144,935 - GFF3633 0.32 -0.6 144,935 - GFF3633 0.32 -1.4 144,935 - GFF3633 0.32 -0.1 144,935 - GFF3633 0.32 +0.2 144,935 - GFF3633 0.32 +0.2 144,935 - GFF3633 0.32 +0.3 144,935 - GFF3633 0.32 -0.2 144,935 - GFF3633 0.32 -1.7 144,935 - GFF3633 0.32 +0.5 144,935 - GFF3633 0.32 -1.4
Or see this region's nucleotide sequence