Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3470 and GFF3471 are separated by 91 nucleotides GFF3471 and GFF3472 overlap by 4 nucleotides GFF3472 and GFF3473 are separated by 110 nucleotides
GFF3470 - Permease of the drug/metabolite transporter (DMT) superfamily, at 290,821 to 291,729
GFF3470
GFF3471 - hypothetical protein, at 291,821 to 292,321
GFF3471
GFF3472 - Nitrilotriacetate monooxygenase component B (EC 1.14.13.-), at 292,318 to 292,761
GFF3472
GFF3473 - no description, at 292,872 to 293,801
GFF3473
Position (kb) 292
293 Strain fitness (log2 ratio) -1
0
1
2 at 291.413 kb on + strand, within GFF3470 at 291.413 kb on + strand, within GFF3470 at 291.413 kb on + strand, within GFF3470 at 291.413 kb on + strand, within GFF3470 at 291.413 kb on + strand, within GFF3470 at 291.414 kb on - strand, within GFF3470 at 291.414 kb on - strand, within GFF3470 at 291.414 kb on - strand, within GFF3470 at 291.553 kb on + strand, within GFF3470 at 291.553 kb on + strand, within GFF3470 at 291.553 kb on + strand, within GFF3470 at 291.554 kb on - strand, within GFF3470 at 291.776 kb on + strand at 291.777 kb on - strand at 291.795 kb on - strand at 291.841 kb on - strand at 291.841 kb on - strand at 291.963 kb on + strand, within GFF3471 at 291.963 kb on + strand, within GFF3471 at 291.964 kb on - strand, within GFF3471 at 291.964 kb on - strand, within GFF3471 at 291.964 kb on - strand, within GFF3471 at 292.062 kb on + strand, within GFF3471 at 292.159 kb on + strand, within GFF3471 at 292.161 kb on + strand, within GFF3471 at 292.161 kb on + strand, within GFF3471 at 292.161 kb on + strand, within GFF3471 at 292.161 kb on + strand, within GFF3471 at 292.161 kb on + strand, within GFF3471 at 292.162 kb on - strand, within GFF3471 at 292.162 kb on - strand, within GFF3471 at 292.162 kb on - strand, within GFF3471 at 292.162 kb on - strand, within GFF3471 at 292.162 kb on - strand, within GFF3471 at 292.162 kb on - strand, within GFF3471 at 292.337 kb on + strand at 292.595 kb on + strand, within GFF3472 at 292.596 kb on - strand, within GFF3472 at 292.822 kb on - strand at 292.952 kb on + strand at 292.953 kb on - strand at 292.978 kb on + strand, within GFF3473 at 292.978 kb on + strand, within GFF3473 at 292.979 kb on - strand, within GFF3473 at 292.979 kb on - strand, within GFF3473 at 293.647 kb on + strand, within GFF3473
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 291,413 + GFF3470 0.65 +0.3 291,413 + GFF3470 0.65 -0.1 291,413 + GFF3470 0.65 -0.5 291,413 + GFF3470 0.65 -0.2 291,413 + GFF3470 0.65 +1.8 291,414 - GFF3470 0.65 -0.2 291,414 - GFF3470 0.65 -1.2 291,414 - GFF3470 0.65 +0.7 291,553 + GFF3470 0.81 +0.8 291,553 + GFF3470 0.81 +0.6 291,553 + GFF3470 0.81 -0.7 291,554 - GFF3470 0.81 -0.7 291,776 + -0.1 291,777 - -0.2 291,795 - +0.7 291,841 - -0.4 291,841 - +0.3 291,963 + GFF3471 0.28 +0.8 291,963 + GFF3471 0.28 +1.6 291,964 - GFF3471 0.29 -0.7 291,964 - GFF3471 0.29 -0.6 291,964 - GFF3471 0.29 -1.0 292,062 + GFF3471 0.48 -1.2 292,159 + GFF3471 0.67 +0.1 292,161 + GFF3471 0.68 +0.5 292,161 + GFF3471 0.68 +0.4 292,161 + GFF3471 0.68 -0.4 292,161 + GFF3471 0.68 +0.0 292,161 + GFF3471 0.68 -0.1 292,162 - GFF3471 0.68 +0.7 292,162 - GFF3471 0.68 -1.2 292,162 - GFF3471 0.68 -0.7 292,162 - GFF3471 0.68 +0.3 292,162 - GFF3471 0.68 -0.5 292,162 - GFF3471 0.68 +0.3 292,337 + +0.0 292,595 + GFF3472 0.62 +0.1 292,596 - GFF3472 0.63 +2.3 292,822 - +0.3 292,952 + +1.4 292,953 - +0.6 292,978 + GFF3473 0.11 -0.3 292,978 + GFF3473 0.11 -0.3 292,979 - GFF3473 0.12 +1.2 292,979 - GFF3473 0.12 -1.3 293,647 + GFF3473 0.83 +1.4
Or see this region's nucleotide sequence