Strain Fitness in Variovorax sp. SCN45 around GFF3281

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
100,749	+				+0.4
100,749	+				-0.2
100,749	+				+0.3
100,749	+				-1.9
100,749	+				-2.2
100,749	+				-0.4
100,749	+				-0.0
100,749	+				-0.4
100,749	+				-0.2
100,750	-				-1.6
100,750	-				-0.2
100,750	-				-0.7
100,750	-				+1.1
100,769	+				-0.4
100,769	+				+0.1
100,769	+				-0.6
100,769	+				-0.5
100,769	+				+0.4
100,769	+				-0.3
100,769	+				-0.7
100,769	+				-0.5
100,769	+				+0.1
100,769	+				-0.9
101,892	+				-0.8
101,892	+				-1.2
101,892	+				+0.2
101,893	-				+0.3
101,893	-				+0.1
101,893	-				+0.0
101,893	-				-0.4
101,893	-				-0.3
101,893	-				-0.2