Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3162 and GFF3163 are separated by 161 nucleotides GFF3163 and GFF3164 are separated by 26 nucleotides
GFF3162 - Sulfoacetaldehyde acetyltransferase (EC 2.3.3.15), at 600,307 to 602,130
GFF3162
GFF3163 - Transcriptional regulator, IclR family, at 602,292 to 603,125
GFF3163
GFF3164 - Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2), at 603,152 to 604,135
GFF3164
Position (kb) 602
603
604 Strain fitness (log2 ratio) -2
-1
0
1
2 at 601.329 kb on - strand, within GFF3162 at 601.589 kb on + strand, within GFF3162 at 601.595 kb on + strand, within GFF3162 at 601.608 kb on + strand, within GFF3162 at 601.665 kb on - strand, within GFF3162 at 601.703 kb on + strand, within GFF3162 at 601.703 kb on + strand, within GFF3162 at 601.703 kb on + strand, within GFF3162 at 601.817 kb on + strand, within GFF3162 at 601.904 kb on + strand, within GFF3162 at 601.905 kb on - strand, within GFF3162 at 601.979 kb on + strand at 602.216 kb on + strand at 602.217 kb on - strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.218 kb on + strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.219 kb on - strand at 602.291 kb on + strand at 602.526 kb on + strand, within GFF3163 at 602.676 kb on + strand, within GFF3163 at 602.676 kb on + strand, within GFF3163 at 602.716 kb on - strand, within GFF3163 at 602.832 kb on + strand, within GFF3163 at 602.833 kb on - strand, within GFF3163 at 602.833 kb on - strand, within GFF3163 at 603.281 kb on + strand, within GFF3164 at 603.282 kb on - strand, within GFF3164 at 603.282 kb on - strand, within GFF3164 at 603.569 kb on + strand, within GFF3164 at 603.569 kb on + strand, within GFF3164 at 603.654 kb on - strand, within GFF3164 at 603.732 kb on - strand, within GFF3164 at 603.798 kb on - strand, within GFF3164
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 601,329 - GFF3162 0.56 -0.5 601,589 + GFF3162 0.70 -0.9 601,595 + GFF3162 0.71 -0.2 601,608 + GFF3162 0.71 -0.0 601,665 - GFF3162 0.74 -0.0 601,703 + GFF3162 0.77 +0.4 601,703 + GFF3162 0.77 -0.4 601,703 + GFF3162 0.77 +0.2 601,817 + GFF3162 0.83 +0.5 601,904 + GFF3162 0.88 -0.3 601,905 - GFF3162 0.88 +1.0 601,979 + -0.7 602,216 + +2.0 602,217 - -1.3 602,218 + +2.0 602,218 + -1.2 602,218 + +0.1 602,218 + +0.0 602,218 + +0.5 602,218 + -0.6 602,219 - +0.1 602,219 - -2.1 602,219 - +0.1 602,219 - -0.7 602,219 - +0.5 602,219 - -0.5 602,219 - -0.3 602,219 - +0.2 602,291 + +0.7 602,526 + GFF3163 0.28 -0.5 602,676 + GFF3163 0.46 -1.0 602,676 + GFF3163 0.46 -0.7 602,716 - GFF3163 0.51 -0.8 602,832 + GFF3163 0.65 -1.0 602,833 - GFF3163 0.65 -1.0 602,833 - GFF3163 0.65 +0.3 603,281 + GFF3164 0.13 -0.3 603,282 - GFF3164 0.13 -0.5 603,282 - GFF3164 0.13 +0.2 603,569 + GFF3164 0.42 -0.1 603,569 + GFF3164 0.42 +0.6 603,654 - GFF3164 0.51 -0.6 603,732 - GFF3164 0.59 -0.5 603,798 - GFF3164 0.66 -0.6
Or see this region's nucleotide sequence