Strain Fitness in Variovorax sp. SCN45 around GFF3132

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
561,909	+		GFF3131	0.74	+0.6
561,909	+		GFF3131	0.74	+1.1
561,910	-		GFF3131	0.74	-0.6
561,954	+		GFF3131	0.75	-0.5
562,035	+		GFF3131	0.78	+0.2
562,035	+		GFF3131	0.78	-1.6
562,233	+		GFF3131	0.84	-1.0
562,236	+		GFF3131	0.84	-0.0
562,236	+		GFF3131	0.84	+0.3
562,376	+		GFF3131	0.89	+0.7
562,461	+				-0.2
562,494	+				-0.8
562,719	+				-0.3
562,925	+		GFF3132	0.31	-0.0
563,249	-				+0.3
563,458	+				-0.0
563,459	-				+0.6
563,571	-				-0.5
563,844	-		GFF3133	0.32	+0.2
563,973	-		GFF3133	0.43	-1.0