Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3015 and GFF3016 overlap by 4 nucleotides GFF3016 and GFF3017 are separated by 13 nucleotides
GFF3015 - T6SS component TssF (ImpG/VasA), at 441,261 to 443,072
GFF3015
GFF3016 - T6SS component TssG (ImpH/VasB), at 443,069 to 444,082
GFF3016
GFF3017 - T6SS AAA+ chaperone ClpV (TssH), at 444,096 to 446,837
GFF3017
Position (kb) 443
444
445 Strain fitness (log2 ratio) -2
-1
0
1 at 442.240 kb on - strand, within GFF3015 at 442.240 kb on - strand, within GFF3015 at 442.245 kb on + strand, within GFF3015 at 442.245 kb on + strand, within GFF3015 at 442.246 kb on - strand, within GFF3015 at 442.246 kb on - strand, within GFF3015 at 442.246 kb on - strand, within GFF3015 at 442.246 kb on - strand, within GFF3015 at 442.246 kb on - strand, within GFF3015 at 442.527 kb on + strand, within GFF3015 at 442.527 kb on + strand, within GFF3015 at 442.527 kb on + strand, within GFF3015 at 442.528 kb on - strand, within GFF3015 at 442.528 kb on - strand, within GFF3015 at 442.528 kb on - strand, within GFF3015 at 442.528 kb on - strand, within GFF3015 at 442.528 kb on - strand, within GFF3015 at 442.528 kb on - strand, within GFF3015 at 442.632 kb on + strand, within GFF3015 at 442.873 kb on - strand, within GFF3015 at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.974 kb on + strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 442.975 kb on - strand at 444.096 kb on - strand at 444.096 kb on - strand at 444.192 kb on + strand at 444.732 kb on + strand, within GFF3017
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 442,240 - GFF3015 0.54 +0.6 442,240 - GFF3015 0.54 -0.6 442,245 + GFF3015 0.54 +0.3 442,245 + GFF3015 0.54 -1.6 442,246 - GFF3015 0.54 -0.8 442,246 - GFF3015 0.54 +1.5 442,246 - GFF3015 0.54 -0.3 442,246 - GFF3015 0.54 +0.8 442,246 - GFF3015 0.54 -0.0 442,527 + GFF3015 0.70 -0.4 442,527 + GFF3015 0.70 +0.7 442,527 + GFF3015 0.70 -0.0 442,528 - GFF3015 0.70 +0.4 442,528 - GFF3015 0.70 -0.6 442,528 - GFF3015 0.70 -0.2 442,528 - GFF3015 0.70 +0.3 442,528 - GFF3015 0.70 -0.5 442,528 - GFF3015 0.70 +0.3 442,632 + GFF3015 0.76 -0.7 442,873 - GFF3015 0.89 +0.5 442,974 + -0.5 442,974 + -0.2 442,974 + +0.5 442,974 + -0.6 442,974 + -0.6 442,974 + +0.0 442,974 + -0.6 442,974 + -0.7 442,974 + -0.4 442,974 + +0.3 442,974 + +1.1 442,974 + -0.6 442,974 + +0.7 442,975 - +0.6 442,975 - -1.5 442,975 - -0.5 442,975 - -0.9 442,975 - +0.8 442,975 - +0.4 442,975 - +0.1 442,975 - +0.5 442,975 - -0.6 444,096 - -0.8 444,096 - -0.8 444,192 + -0.5 444,732 + GFF3017 0.23 -1.8
Or see this region's nucleotide sequence