Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2927 and GFF2928 are separated by 187 nucleotides GFF2928 and GFF2929 are separated by 125 nucleotides GFF2929 and GFF2930 are separated by 108 nucleotides
GFF2927 - Peptidylprolyl isomerase, FKBP-type (EC 5.2.1.8), at 353,788 to 354,138
GFF2927
GFF2928 - Heat shock protein GrpE, at 354,326 to 354,862
GFF2928
GFF2929 - Chaperone protein DnaK, at 354,988 to 356,925
GFF2929
GFF2930 - Chaperone protein DnaJ, at 357,034 to 358,173
GFF2930
Position (kb) 354
355
356
357 Strain fitness (log2 ratio) -1
0
1
2 at 354.058 kb on + strand, within GFF2927 at 354.058 kb on + strand, within GFF2927 at 354.058 kb on + strand, within GFF2927 at 354.058 kb on + strand, within GFF2927 at 354.058 kb on + strand, within GFF2927 at 354.058 kb on + strand, within GFF2927 at 354.058 kb on + strand, within GFF2927 at 354.059 kb on - strand, within GFF2927 at 354.059 kb on - strand, within GFF2927 at 354.059 kb on - strand, within GFF2927 at 354.252 kb on + strand at 354.860 kb on + strand at 354.860 kb on + strand at 354.860 kb on + strand at 354.861 kb on - strand at 354.861 kb on - strand at 354.917 kb on + strand at 354.917 kb on + strand at 354.917 kb on + strand at 354.917 kb on + strand at 354.917 kb on + strand at 354.917 kb on + strand at 354.951 kb on + strand at 354.951 kb on + strand at 354.951 kb on + strand at 354.951 kb on + strand at 354.951 kb on + strand at 354.951 kb on + strand at 354.959 kb on + strand at 354.959 kb on + strand at 356.990 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 354,058 + GFF2927 0.77 -1.0 354,058 + GFF2927 0.77 -0.5 354,058 + GFF2927 0.77 -0.3 354,058 + GFF2927 0.77 -0.8 354,058 + GFF2927 0.77 -0.7 354,058 + GFF2927 0.77 -0.1 354,058 + GFF2927 0.77 -0.4 354,059 - GFF2927 0.77 -0.1 354,059 - GFF2927 0.77 -0.2 354,059 - GFF2927 0.77 +0.1 354,252 + -0.6 354,860 + -1.1 354,860 + -0.1 354,860 + +1.2 354,861 - +1.9 354,861 - -0.8 354,917 + +1.1 354,917 + -0.3 354,917 + -0.2 354,917 + -0.7 354,917 + +0.1 354,917 + -1.0 354,951 + -0.4 354,951 + -0.9 354,951 + -0.2 354,951 + -0.2 354,951 + +0.7 354,951 + +0.1 354,959 + -0.1 354,959 + +1.9 356,990 + +1.5
Or see this region's nucleotide sequence