Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2878 and GFF2879 are separated by 296 nucleotides GFF2879 and GFF2880 are separated by 105 nucleotides
GFF2878 - DNA primase DnaG, at 300,775 to 302,820
GFF2878
GFF2879 - RNA polymerase sigma factor RpoD, at 303,117 to 305,447
GFF2879
GFF2880 - Multidrug resistance transporter, Bcr/CflA family, at 305,553 to 306,788
GFF2880
Position (kb) 303
304
305
306 Strain fitness (log2 ratio) -2
-1
0
1
2 at 302.837 kb on + strand at 302.838 kb on - strand at 302.838 kb on - strand at 302.838 kb on - strand at 302.839 kb on + strand at 302.844 kb on + strand at 302.844 kb on + strand at 302.844 kb on + strand at 302.867 kb on + strand at 302.867 kb on + strand at 302.925 kb on + strand at 302.925 kb on + strand at 302.925 kb on + strand at 302.948 kb on + strand at 302.949 kb on - strand at 303.105 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.116 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 303.215 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.445 kb on + strand at 305.446 kb on - strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.533 kb on + strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.534 kb on - strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.652 kb on + strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.653 kb on - strand at 305.727 kb on + strand, within GFF2880 at 305.727 kb on + strand, within GFF2880 at 305.727 kb on + strand, within GFF2880 at 305.727 kb on + strand, within GFF2880 at 305.727 kb on + strand, within GFF2880 at 305.727 kb on + strand, within GFF2880 at 305.727 kb on + strand, within GFF2880 at 305.728 kb on - strand, within GFF2880 at 305.728 kb on - strand, within GFF2880 at 305.728 kb on - strand, within GFF2880 at 305.728 kb on - strand, within GFF2880 at 305.991 kb on + strand, within GFF2880 at 305.991 kb on + strand, within GFF2880 at 305.991 kb on + strand, within GFF2880 at 305.991 kb on + strand, within GFF2880 at 305.991 kb on + strand, within GFF2880 at 305.991 kb on + strand, within GFF2880 at 305.992 kb on - strand, within GFF2880 at 305.992 kb on - strand, within GFF2880 at 305.992 kb on - strand, within GFF2880 at 305.992 kb on - strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.111 kb on + strand, within GFF2880 at 306.112 kb on - strand, within GFF2880 at 306.112 kb on - strand, within GFF2880 at 306.112 kb on - strand, within GFF2880 at 306.112 kb on - strand, within GFF2880 at 306.184 kb on - strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.261 kb on + strand, within GFF2880 at 306.262 kb on - strand, within GFF2880 at 306.262 kb on - strand, within GFF2880 at 306.262 kb on - strand, within GFF2880
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 302,837 + +1.8 302,838 - -1.5 302,838 - -0.4 302,838 - -0.9 302,839 + -0.2 302,844 + -0.5 302,844 + +0.2 302,844 + +0.5 302,867 + -1.1 302,867 + +1.5 302,925 + +1.8 302,925 + -0.5 302,925 + -0.3 302,948 + -1.8 302,949 - -0.2 303,105 + -0.7 303,116 + -0.3 303,116 + +0.9 303,116 + +0.2 303,116 + +0.2 303,116 + -0.9 303,116 + -2.7 303,116 + -0.1 303,116 + +0.5 303,116 + -0.9 303,116 + -0.5 303,116 + -1.1 303,116 + -0.0 303,116 + -0.9 303,116 + -1.5 303,215 + +0.4 303,215 + +0.1 303,215 + -0.1 303,215 + +0.1 303,215 + +1.7 303,215 + +0.8 303,215 + -2.2 303,215 + -0.8 303,215 + -0.4 303,215 + -0.3 303,215 + +2.5 303,215 + -0.1 303,215 + +1.3 303,215 + +0.3 303,215 + +0.2 303,215 + +0.2 305,445 + -0.4 305,445 + +0.2 305,445 + +0.0 305,445 + -0.3 305,445 + -0.4 305,445 + -0.0 305,445 + +0.0 305,445 + +0.3 305,445 + +0.9 305,446 - -0.1 305,533 + -0.4 305,533 + -0.7 305,533 + -0.7 305,533 + -0.7 305,533 + -0.9 305,533 + +1.5 305,533 + -1.3 305,533 + +0.7 305,533 + -0.5 305,533 + +0.2 305,533 + -1.4 305,533 + +0.9 305,534 - -0.8 305,534 - -0.2 305,534 - -0.5 305,534 - +0.1 305,534 - +1.8 305,534 - -1.1 305,534 - +0.5 305,534 - +0.3 305,534 - +0.5 305,534 - +1.2 305,534 - +0.1 305,534 - -1.0 305,534 - -1.7 305,652 + +0.0 305,652 + -0.2 305,652 + -1.3 305,652 + -1.1 305,652 + -1.1 305,652 + -1.5 305,652 + -1.1 305,652 + +0.1 305,652 + -0.8 305,652 + -0.3 305,652 + -0.8 305,652 + -0.5 305,652 + -0.0 305,652 + -0.2 305,652 + -0.1 305,652 + -0.6 305,652 + -0.7 305,652 + -0.8 305,652 + +0.7 305,652 + +0.1 305,652 + -1.2 305,652 + -0.4 305,653 - -1.5 305,653 - -0.2 305,653 - -0.3 305,653 - +0.4 305,653 - +0.2 305,653 - +0.7 305,653 - -0.2 305,653 - +0.1 305,653 - -0.1 305,653 - +0.7 305,653 - -0.7 305,653 - +0.1 305,653 - +0.0 305,653 - -0.6 305,653 - +0.0 305,653 - -0.1 305,653 - -0.8 305,653 - +0.2 305,653 - +0.6 305,653 - -1.7 305,727 + GFF2880 0.14 -0.5 305,727 + GFF2880 0.14 +0.8 305,727 + GFF2880 0.14 -0.2 305,727 + GFF2880 0.14 -0.6 305,727 + GFF2880 0.14 -0.9 305,727 + GFF2880 0.14 -1.1 305,727 + GFF2880 0.14 +0.5 305,728 - GFF2880 0.14 +0.2 305,728 - GFF2880 0.14 -0.9 305,728 - GFF2880 0.14 +0.1 305,728 - GFF2880 0.14 -0.1 305,991 + GFF2880 0.35 +1.3 305,991 + GFF2880 0.35 -0.2 305,991 + GFF2880 0.35 +0.1 305,991 + GFF2880 0.35 +1.4 305,991 + GFF2880 0.35 +0.8 305,991 + GFF2880 0.35 -0.3 305,992 - GFF2880 0.36 -0.4 305,992 - GFF2880 0.36 +0.3 305,992 - GFF2880 0.36 +0.5 305,992 - GFF2880 0.36 +0.2 306,111 + GFF2880 0.45 -0.8 306,111 + GFF2880 0.45 -0.5 306,111 + GFF2880 0.45 -0.2 306,111 + GFF2880 0.45 -0.1 306,111 + GFF2880 0.45 -0.2 306,111 + GFF2880 0.45 -0.4 306,111 + GFF2880 0.45 -0.7 306,111 + GFF2880 0.45 -0.7 306,112 - GFF2880 0.45 -0.8 306,112 - GFF2880 0.45 +0.6 306,112 - GFF2880 0.45 -0.3 306,112 - GFF2880 0.45 +0.9 306,184 - GFF2880 0.51 -0.1 306,261 + GFF2880 0.57 -2.1 306,261 + GFF2880 0.57 +0.2 306,261 + GFF2880 0.57 -0.4 306,261 + GFF2880 0.57 -0.1 306,261 + GFF2880 0.57 -0.1 306,261 + GFF2880 0.57 -0.2 306,261 + GFF2880 0.57 -0.0 306,262 - GFF2880 0.57 +0.3 306,262 - GFF2880 0.57 +0.6 306,262 - GFF2880 0.57 -0.6
Or see this region's nucleotide sequence