Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2859 and GFF2860 are separated by 93 nucleotides GFF2860 and GFF2861 are separated by 153 nucleotides GFF2861 and GFF2862 are separated by 119 nucleotides
GFF2859 - Excinuclease ABC subunit C, at 281,934 to 283,901
GFF2859
GFF2860 - FIG00974036: hypothetical protein, at 283,995 to 285,065
GFF2860
GFF2861 - Translation elongation factor P, at 285,219 to 285,773
GFF2861
GFF2862 - FIG01199081: hypothetical protein, at 285,893 to 286,756
GFF2862
Position (kb) 283
284
285
286 Strain fitness (log2 ratio) -2
-1
0
1
2 at 283.052 kb on - strand, within GFF2859 at 283.336 kb on + strand, within GFF2859 at 283.336 kb on + strand, within GFF2859 at 283.336 kb on + strand, within GFF2859 at 283.336 kb on + strand, within GFF2859 at 283.337 kb on - strand, within GFF2859 at 283.337 kb on - strand, within GFF2859 at 283.390 kb on + strand, within GFF2859 at 283.391 kb on - strand, within GFF2859 at 283.391 kb on - strand, within GFF2859 at 283.421 kb on - strand, within GFF2859 at 283.421 kb on - strand, within GFF2859 at 283.421 kb on - strand, within GFF2859 at 283.421 kb on - strand, within GFF2859 at 283.421 kb on - strand, within GFF2859 at 283.421 kb on - strand, within GFF2859 at 283.513 kb on + strand, within GFF2859 at 283.514 kb on - strand, within GFF2859 at 283.544 kb on - strand, within GFF2859 at 283.544 kb on - strand, within GFF2859 at 283.544 kb on - strand, within GFF2859 at 283.546 kb on + strand, within GFF2859 at 283.546 kb on + strand, within GFF2859 at 283.546 kb on + strand, within GFF2859 at 283.546 kb on + strand, within GFF2859 at 283.546 kb on + strand, within GFF2859 at 283.585 kb on + strand, within GFF2859 at 283.591 kb on + strand, within GFF2859 at 283.591 kb on + strand, within GFF2859 at 283.591 kb on + strand, within GFF2859 at 283.591 kb on + strand, within GFF2859 at 283.591 kb on + strand, within GFF2859 at 283.591 kb on + strand, within GFF2859 at 283.592 kb on - strand, within GFF2859 at 283.592 kb on - strand, within GFF2859 at 283.592 kb on - strand, within GFF2859 at 283.592 kb on - strand, within GFF2859 at 283.592 kb on - strand, within GFF2859 at 283.592 kb on - strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.621 kb on + strand, within GFF2859 at 283.622 kb on - strand, within GFF2859 at 283.622 kb on - strand, within GFF2859 at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.759 kb on + strand at 283.760 kb on - strand at 283.760 kb on - strand at 283.760 kb on - strand at 283.760 kb on - strand at 283.760 kb on - strand at 283.801 kb on + strand at 283.801 kb on + strand at 283.801 kb on + strand at 283.801 kb on + strand at 283.801 kb on + strand at 283.801 kb on + strand at 283.801 kb on + strand at 283.802 kb on - strand at 283.802 kb on - strand at 283.802 kb on - strand at 283.802 kb on - strand at 283.802 kb on - strand at 283.802 kb on - strand at 283.802 kb on - strand at 283.828 kb on + strand at 283.829 kb on - strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.834 kb on + strand at 283.835 kb on - strand at 283.835 kb on - strand at 283.835 kb on - strand at 283.908 kb on + strand at 283.909 kb on - strand at 283.909 kb on - strand at 283.909 kb on - strand at 283.909 kb on - strand at 283.994 kb on + strand at 283.994 kb on + strand at 283.994 kb on + strand at 283.994 kb on + strand at 283.994 kb on + strand at 283.994 kb on + strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 283.995 kb on - strand at 285.063 kb on + strand at 285.063 kb on + strand at 285.064 kb on - strand at 285.064 kb on - strand at 285.068 kb on + strand at 285.068 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.142 kb on + strand at 285.169 kb on + strand at 285.169 kb on + strand at 285.169 kb on + strand at 285.169 kb on + strand at 285.218 kb on + strand at 285.218 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 283,052 - GFF2859 0.57 +2.5 283,336 + GFF2859 0.71 -1.7 283,336 + GFF2859 0.71 +0.4 283,336 + GFF2859 0.71 -0.5 283,336 + GFF2859 0.71 +0.5 283,337 - GFF2859 0.71 -1.0 283,337 - GFF2859 0.71 -0.5 283,390 + GFF2859 0.74 +1.4 283,391 - GFF2859 0.74 -0.1 283,391 - GFF2859 0.74 +0.1 283,421 - GFF2859 0.76 +1.0 283,421 - GFF2859 0.76 -0.3 283,421 - GFF2859 0.76 +1.0 283,421 - GFF2859 0.76 -0.0 283,421 - GFF2859 0.76 -0.5 283,421 - GFF2859 0.76 +0.8 283,513 + GFF2859 0.80 -0.5 283,514 - GFF2859 0.80 +1.5 283,544 - GFF2859 0.82 -2.2 283,544 - GFF2859 0.82 -0.5 283,544 - GFF2859 0.82 -0.1 283,546 + GFF2859 0.82 +1.0 283,546 + GFF2859 0.82 +0.9 283,546 + GFF2859 0.82 -0.1 283,546 + GFF2859 0.82 -0.4 283,546 + GFF2859 0.82 +0.3 283,585 + GFF2859 0.84 -0.4 283,591 + GFF2859 0.84 -0.8 283,591 + GFF2859 0.84 +0.3 283,591 + GFF2859 0.84 +0.2 283,591 + GFF2859 0.84 +0.3 283,591 + GFF2859 0.84 -0.1 283,591 + GFF2859 0.84 -1.3 283,592 - GFF2859 0.84 +0.6 283,592 - GFF2859 0.84 -1.0 283,592 - GFF2859 0.84 -0.5 283,592 - GFF2859 0.84 -0.4 283,592 - GFF2859 0.84 -0.6 283,592 - GFF2859 0.84 -0.2 283,621 + GFF2859 0.86 +0.8 283,621 + GFF2859 0.86 -0.3 283,621 + GFF2859 0.86 -1.3 283,621 + GFF2859 0.86 +0.1 283,621 + GFF2859 0.86 +0.8 283,621 + GFF2859 0.86 +0.1 283,621 + GFF2859 0.86 +0.3 283,621 + GFF2859 0.86 -0.1 283,622 - GFF2859 0.86 +0.3 283,622 - GFF2859 0.86 -0.9 283,759 + -0.1 283,759 + +0.1 283,759 + -0.3 283,759 + -0.2 283,759 + +0.0 283,759 + +0.9 283,759 + -1.3 283,759 + -1.5 283,759 + +0.3 283,760 - -0.1 283,760 - -0.1 283,760 - +0.3 283,760 - -0.1 283,760 - -1.1 283,801 + -0.1 283,801 + +0.2 283,801 + +0.2 283,801 + +0.4 283,801 + -0.1 283,801 + +2.7 283,801 + -0.1 283,802 - +0.5 283,802 - -0.2 283,802 - +0.3 283,802 - -0.6 283,802 - +0.3 283,802 - +2.0 283,802 - -0.7 283,828 + +0.8 283,829 - -0.1 283,834 + -0.6 283,834 + -0.5 283,834 + +0.0 283,834 + -0.5 283,834 + -0.3 283,834 + +0.1 283,834 + +1.2 283,834 + +0.1 283,835 - -0.7 283,835 - -0.6 283,835 - -0.3 283,908 + -0.3 283,909 - -1.3 283,909 - +0.4 283,909 - -0.4 283,909 - -0.6 283,994 + +0.5 283,994 + -2.7 283,994 + -0.8 283,994 + +1.5 283,994 + -0.9 283,994 + -1.7 283,995 - -0.3 283,995 - +0.0 283,995 - -1.7 283,995 - -0.4 283,995 - +2.1 283,995 - +0.2 283,995 - +1.3 283,995 - -0.4 283,995 - -0.2 283,995 - +0.2 283,995 - -0.5 285,063 + +0.9 285,063 + +1.1 285,064 - -0.2 285,064 - +0.3 285,068 + +0.1 285,068 + -0.8 285,142 + -0.8 285,142 + -0.9 285,142 + +0.6 285,142 + -0.7 285,142 + -0.8 285,142 + +0.6 285,142 + -2.0 285,142 + -0.8 285,142 + -0.5 285,169 + -0.8 285,169 + -0.4 285,169 + +0.1 285,169 + +0.0 285,218 + -0.9 285,218 + +0.1
Or see this region's nucleotide sequence