Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2765 and GFF2766 overlap by 4 nucleotides GFF2766 and GFF2767 are separated by 9 nucleotides GFF2767 and GFF2768 are separated by 38 nucleotides
GFF2765 - FIG00005326: uncharacterized protein, at 196,060 to 196,872
GFF2765
GFF2766 - Pentapeptide repeat family protein, at 196,869 to 197,555
GFF2766
GFF2767 - MaoC domain protein dehydratase, at 197,565 to 198,044
GFF2767
GFF2768 - 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16), at 198,083 to 199,216
GFF2768
Position (kb) 197
198
199 Strain fitness (log2 ratio) -1
0
1
2 at 196.702 kb on + strand, within GFF2765 at 196.703 kb on - strand, within GFF2765 at 196.703 kb on - strand, within GFF2765 at 196.747 kb on + strand, within GFF2765 at 196.748 kb on - strand, within GFF2765 at 196.768 kb on + strand, within GFF2765 at 198.004 kb on + strand at 198.004 kb on + strand at 198.005 kb on - strand at 198.005 kb on - strand at 198.005 kb on - strand at 198.005 kb on - strand at 198.005 kb on - strand at 198.147 kb on + strand at 198.792 kb on + strand, within GFF2768 at 198.792 kb on + strand, within GFF2768 at 198.792 kb on + strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768 at 198.793 kb on - strand, within GFF2768
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 196,702 + GFF2765 0.79 +0.8 196,703 - GFF2765 0.79 -0.6 196,703 - GFF2765 0.79 -0.1 196,747 + GFF2765 0.85 +0.3 196,748 - GFF2765 0.85 -0.3 196,768 + GFF2765 0.87 -0.3 198,004 + -0.8 198,004 + +0.3 198,005 - +1.3 198,005 - +0.5 198,005 - -0.6 198,005 - -0.6 198,005 - -0.1 198,147 + -0.3 198,792 + GFF2768 0.63 +0.0 198,792 + GFF2768 0.63 -0.5 198,792 + GFF2768 0.63 -0.2 198,793 - GFF2768 0.63 +0.3 198,793 - GFF2768 0.63 +1.0 198,793 - GFF2768 0.63 +0.3 198,793 - GFF2768 0.63 +0.2 198,793 - GFF2768 0.63 +0.1 198,793 - GFF2768 0.63 +2.1 198,793 - GFF2768 0.63 +0.3 198,793 - GFF2768 0.63 +0.8 198,793 - GFF2768 0.63 -0.5 198,793 - GFF2768 0.63 -0.5 198,793 - GFF2768 0.63 -0.0 198,793 - GFF2768 0.63 -0.1 198,793 - GFF2768 0.63 -0.7
Or see this region's nucleotide sequence