Strain Fitness in Variovorax sp. SCN45 around GFF2700

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
126,862	+		GFF2698	0.60	-0.4
126,862	+		GFF2698	0.60	-1.1
126,862	+		GFF2698	0.60	-1.3
126,863	-		GFF2698	0.60	-0.9
126,863	-		GFF2698	0.60	+0.7
127,204	+				-0.4
127,423	+		GFF2699	0.50	+0.2
127,489	+		GFF2699	0.70	+0.9
127,511	-		GFF2699	0.76	-0.1
127,511	-		GFF2699	0.76	-0.9
127,597	-				+0.8
127,620	-				+1.3
128,741	-		GFF2701	0.30	-0.4
129,184	+		GFF2701	0.68	-0.0
129,184	+		GFF2701	0.68	+0.3
129,184	+		GFF2701	0.68	+0.8