Strain Fitness in Variovorax sp. SCN45 around GFF2690

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
118,795	+				+0.6
118,927	+		GFF2689	0.18	-0.4
119,131	+		GFF2689	0.39	-0.1
119,131	+		GFF2689	0.39	+0.0
119,231	-		GFF2689	0.49	-0.6
119,272	-		GFF2689	0.54	-2.2
119,371	+		GFF2689	0.64	-0.3
119,536	+		GFF2689	0.81	-0.2
119,537	-		GFF2689	0.81	+0.1
119,537	-		GFF2689	0.81	+2.0
119,537	-		GFF2689	0.81	-0.7
119,564	-		GFF2689	0.84	-0.0
119,591	+		GFF2689	0.87	-0.7
119,592	-		GFF2689	0.87	+0.7
119,782	-		GFF2690	0.15	+0.8
119,851	+		GFF2690	0.30	-0.4
120,217	+				-0.3
120,217	+				+0.9
120,218	-				-1.0
120,360	+		GFF2691	0.15	-1.6
120,361	-		GFF2691	0.15	+1.5
120,361	-		GFF2691	0.15	+0.5
120,749	+		GFF2691	0.72	-0.8
120,749	+		GFF2691	0.72	+1.9
120,750	-		GFF2691	0.73	-0.5
120,782	+		GFF2691	0.77	+0.5
120,867	-				-0.3
120,875	+				-0.1
120,875	+				+0.3
120,876	-				-0.7
121,115	-		GFF2692	0.32	-0.2