Strain Fitness in Variovorax sp. SCN45 around GFF2670

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
91,919	+		GFF2669	0.12	-1.1
92,173	+		GFF2669	0.36	-0.2
92,173	+		GFF2669	0.36	-0.1
92,173	+		GFF2669	0.36	-0.2
92,173	+		GFF2669	0.36	+0.1
92,174	-		GFF2669	0.36	-0.8
92,973	+		GFF2670	0.41	+0.6
93,362	+		GFF2671	0.20	-0.9
93,362	+		GFF2671	0.20	+0.2
93,362	+		GFF2671	0.20	+0.4
93,363	-		GFF2671	0.20	-0.2
94,011	+		GFF2671	0.76	-0.1
94,011	+		GFF2671	0.76	-0.9
94,012	-		GFF2671	0.76	+0.5
94,012	-		GFF2671	0.76	-0.4
94,012	-		GFF2671	0.76	-0.4