Strain Fitness in Variovorax sp. SCN45 around GFF2660

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
81,352	+				-0.1
81,352	+				-0.4
81,352	+				-0.2
81,353	-				+0.5
81,638	+		GFF2659	0.24	-2.4
81,638	+		GFF2659	0.24	-2.0
82,094	+		GFF2659	0.73	-2.6
82,094	+		GFF2659	0.73	-0.9
82,094	+		GFF2659	0.73	-1.2
83,151	+				-0.6
83,152	-				-0.2
83,152	-				+0.3
83,152	-				+0.5
83,152	-				-0.5
83,234	+				-0.6
83,234	+				+0.3
83,234	+				+0.7
83,236	+				-0.5
83,236	+				-0.1
83,236	+				-0.9
83,237	-				-0.6
83,237	-				+1.1
83,237	-				+0.8
83,237	-				+0.1
83,310	+				-0.4
83,310	+				+0.9
83,310	+				-0.3
83,311	-				+0.2
83,311	-				+0.5
83,311	-				+0.1
83,538	-		GFF2661	0.24	-0.2
83,667	-		GFF2661	0.34	+0.5
83,769	-		GFF2661	0.42	-1.7
83,769	-		GFF2661	0.42	+1.5
83,769	-		GFF2661	0.42	-0.5
83,974	-		GFF2661	0.58	-0.7