Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2524 and GFF2525 are separated by 96 nucleotides GFF2525 and GFF2526 are separated by 112 nucleotides GFF2526 and GFF2527 are separated by 7 nucleotides GFF2527 and GFF2528 overlap by 1 nucleotides
GFF2524 - Peptide chain release factor 1, at 584,412 to 585,500
GFF2524
GFF2525 - Glutamyl-tRNA reductase (EC 1.2.1.70), at 585,597 to 586,868
GFF2525
GFF2526 - no description, at 586,981 to 587,259
GFF2526
GFF2527 - GCN5-related N-acetyltransferase, at 587,267 to 587,794
GFF2527
GFF2528 - ABC transporter, ATP-binding protein PA3838, at 587,794 to 588,588
GFF2528
Position (kb) 585
586
587 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 586.878 kb on + strand at 586.879 kb on - strand at 586.880 kb on + strand at 586.881 kb on - strand at 586.881 kb on - strand at 586.881 kb on - strand at 586.881 kb on - strand at 586.928 kb on + strand at 586.928 kb on + strand at 586.928 kb on + strand at 586.928 kb on + strand at 586.929 kb on - strand at 586.929 kb on - strand at 586.929 kb on - strand at 586.929 kb on - strand at 586.929 kb on - strand at 586.929 kb on - strand at 586.939 kb on + strand at 586.939 kb on + strand at 586.939 kb on + strand at 586.939 kb on + strand at 586.939 kb on + strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 586.940 kb on - strand at 587.068 kb on + strand, within GFF2526 at 587.068 kb on + strand, within GFF2526 at 587.194 kb on + strand, within GFF2526 at 587.194 kb on + strand, within GFF2526 at 587.194 kb on + strand, within GFF2526 at 587.194 kb on + strand, within GFF2526 at 587.194 kb on + strand, within GFF2526 at 587.195 kb on - strand, within GFF2526 at 587.195 kb on - strand, within GFF2526 at 587.195 kb on - strand, within GFF2526 at 587.195 kb on - strand, within GFF2526 at 587.195 kb on - strand, within GFF2526 at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.295 kb on + strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.296 kb on - strand at 587.313 kb on + strand at 587.313 kb on + strand at 587.313 kb on + strand at 587.314 kb on - strand at 587.314 kb on - strand at 587.314 kb on - strand at 587.314 kb on - strand at 587.314 kb on - strand at 587.364 kb on + strand, within GFF2527 at 587.364 kb on + strand, within GFF2527 at 587.364 kb on + strand, within GFF2527 at 587.364 kb on + strand, within GFF2527 at 587.364 kb on + strand, within GFF2527 at 587.365 kb on - strand, within GFF2527 at 587.365 kb on - strand, within GFF2527 at 587.365 kb on - strand, within GFF2527 at 587.365 kb on - strand, within GFF2527 at 587.365 kb on - strand, within GFF2527 at 587.520 kb on + strand, within GFF2527 at 587.520 kb on + strand, within GFF2527 at 587.520 kb on + strand, within GFF2527 at 587.520 kb on + strand, within GFF2527 at 587.520 kb on + strand, within GFF2527 at 587.521 kb on - strand, within GFF2527 at 587.521 kb on - strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.604 kb on + strand, within GFF2527 at 587.605 kb on - strand, within GFF2527 at 587.605 kb on - strand, within GFF2527 at 587.605 kb on - strand, within GFF2527 at 587.706 kb on + strand, within GFF2527 at 587.707 kb on - strand, within GFF2527 at 587.707 kb on - strand, within GFF2527
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 586,878 + -0.8 586,879 - -0.4 586,880 + +0.1 586,881 - -0.1 586,881 - -0.8 586,881 - +0.3 586,881 - -0.5 586,928 + -2.2 586,928 + +0.9 586,928 + -0.8 586,928 + -2.6 586,929 - +1.1 586,929 - -0.4 586,929 - +0.8 586,929 - -0.1 586,929 - -0.6 586,929 - +0.1 586,939 + -0.3 586,939 + -0.6 586,939 + +0.1 586,939 + -0.5 586,939 + +2.4 586,940 - -0.1 586,940 - -0.6 586,940 - -2.6 586,940 - +0.6 586,940 - -0.4 586,940 - -2.4 586,940 - -0.8 586,940 - -0.6 586,940 - +2.3 586,940 - +0.6 586,940 - +0.7 586,940 - +0.6 587,068 + GFF2526 0.31 -0.0 587,068 + GFF2526 0.31 -0.4 587,194 + GFF2526 0.76 -0.5 587,194 + GFF2526 0.76 -0.7 587,194 + GFF2526 0.76 +1.1 587,194 + GFF2526 0.76 +0.5 587,194 + GFF2526 0.76 +0.9 587,195 - GFF2526 0.77 -1.9 587,195 - GFF2526 0.77 -0.2 587,195 - GFF2526 0.77 -0.2 587,195 - GFF2526 0.77 +0.5 587,195 - GFF2526 0.77 +1.2 587,295 + +1.1 587,295 + +0.9 587,295 + +0.6 587,295 + -0.1 587,295 + -0.2 587,295 + -0.1 587,295 + +0.6 587,295 + -0.1 587,295 + +0.4 587,295 + +1.4 587,295 + -0.5 587,295 + +0.5 587,295 + -2.1 587,295 + -0.5 587,296 - -0.3 587,296 - -0.6 587,296 - +0.8 587,296 - -0.2 587,296 - +0.1 587,296 - -0.2 587,296 - -0.9 587,296 - -0.1 587,296 - -0.3 587,296 - +0.3 587,296 - +0.2 587,313 + -0.8 587,313 + -0.9 587,313 + -2.9 587,314 - +0.2 587,314 - -1.4 587,314 - -0.5 587,314 - -0.5 587,314 - +0.1 587,364 + GFF2527 0.18 -0.5 587,364 + GFF2527 0.18 +0.1 587,364 + GFF2527 0.18 +0.3 587,364 + GFF2527 0.18 +0.5 587,364 + GFF2527 0.18 -0.0 587,365 - GFF2527 0.19 +0.3 587,365 - GFF2527 0.19 +2.9 587,365 - GFF2527 0.19 +2.0 587,365 - GFF2527 0.19 -0.4 587,365 - GFF2527 0.19 +0.2 587,520 + GFF2527 0.48 +0.4 587,520 + GFF2527 0.48 -0.6 587,520 + GFF2527 0.48 -1.2 587,520 + GFF2527 0.48 -0.2 587,520 + GFF2527 0.48 -0.9 587,521 - GFF2527 0.48 -0.1 587,521 - GFF2527 0.48 +0.0 587,604 + GFF2527 0.64 -0.9 587,604 + GFF2527 0.64 -1.4 587,604 + GFF2527 0.64 +0.4 587,604 + GFF2527 0.64 -0.4 587,604 + GFF2527 0.64 +0.6 587,604 + GFF2527 0.64 -0.9 587,604 + GFF2527 0.64 +0.5 587,605 - GFF2527 0.64 -0.5 587,605 - GFF2527 0.64 -0.1 587,605 - GFF2527 0.64 -0.1 587,706 + GFF2527 0.83 +0.4 587,707 - GFF2527 0.83 -0.2 587,707 - GFF2527 0.83 -0.4
Or see this region's nucleotide sequence