Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2465 and GFF2466 overlap by 4 nucleotides GFF2466 and GFF2467 are separated by 2 nucleotides GFF2467 and GFF2468 are separated by 16 nucleotides
GFF2465 - no description, at 525,764 to 525,925
GFF2465
GFF2466 - no description, at 525,922 to 526,788
GFF2466
GFF2467 - Response regulator BaeR, at 526,791 to 527,507
GFF2467
GFF2468 - Outer membrane protein assembly factor YaeT, at 527,524 to 529,926
GFF2468
Position (kb) 526
527
528 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 526.069 kb on + strand, within GFF2466 at 526.069 kb on + strand, within GFF2466 at 526.069 kb on + strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.070 kb on - strand, within GFF2466 at 526.217 kb on - strand, within GFF2466 at 526.445 kb on - strand, within GFF2466 at 526.564 kb on + strand, within GFF2466 at 527.192 kb on - strand, within GFF2467 at 527.192 kb on - strand, within GFF2467 at 527.603 kb on + strand at 527.621 kb on + strand at 527.765 kb on + strand, within GFF2468 at 527.765 kb on + strand, within GFF2468 at 527.765 kb on + strand, within GFF2468 at 527.766 kb on - strand, within GFF2468 at 528.005 kb on + strand, within GFF2468 at 528.005 kb on + strand, within GFF2468 at 528.006 kb on - strand, within GFF2468 at 528.026 kb on + strand, within GFF2468 at 528.027 kb on - strand, within GFF2468 at 528.041 kb on + strand, within GFF2468 at 528.041 kb on + strand, within GFF2468 at 528.041 kb on + strand, within GFF2468 at 528.041 kb on + strand, within GFF2468 at 528.042 kb on - strand, within GFF2468 at 528.042 kb on - strand, within GFF2468 at 528.257 kb on + strand, within GFF2468 at 528.258 kb on - strand, within GFF2468 at 528.263 kb on + strand, within GFF2468 at 528.264 kb on - strand, within GFF2468 at 528.264 kb on - strand, within GFF2468 at 528.285 kb on - strand, within GFF2468 at 528.285 kb on - strand, within GFF2468 at 528.285 kb on - strand, within GFF2468 at 528.314 kb on + strand, within GFF2468 at 528.405 kb on - strand, within GFF2468 at 528.405 kb on - strand, within GFF2468 at 528.405 kb on - strand, within GFF2468 at 528.422 kb on + strand, within GFF2468 at 528.422 kb on + strand, within GFF2468 at 528.423 kb on - strand, within GFF2468 at 528.423 kb on - strand, within GFF2468 at 528.423 kb on - strand, within GFF2468 at 528.423 kb on - strand, within GFF2468 at 528.485 kb on + strand, within GFF2468 at 528.485 kb on + strand, within GFF2468
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 526,069 + GFF2466 0.17 -0.6 526,069 + GFF2466 0.17 +0.2 526,069 + GFF2466 0.17 -0.4 526,070 - GFF2466 0.17 +0.1 526,070 - GFF2466 0.17 +0.2 526,070 - GFF2466 0.17 -1.0 526,217 - GFF2466 0.34 -0.2 526,445 - GFF2466 0.60 -0.7 526,564 + GFF2466 0.74 +0.9 527,192 - GFF2467 0.56 -0.4 527,192 - GFF2467 0.56 -1.9 527,603 + -0.9 527,621 + -0.4 527,765 + GFF2468 0.10 +2.1 527,765 + GFF2468 0.10 +0.6 527,765 + GFF2468 0.10 -1.2 527,766 - GFF2468 0.10 -0.3 528,005 + GFF2468 0.20 +0.2 528,005 + GFF2468 0.20 -0.7 528,006 - GFF2468 0.20 -0.1 528,026 + GFF2468 0.21 -0.4 528,027 - GFF2468 0.21 +0.6 528,041 + GFF2468 0.22 -0.2 528,041 + GFF2468 0.22 -1.7 528,041 + GFF2468 0.22 -0.5 528,041 + GFF2468 0.22 +1.6 528,042 - GFF2468 0.22 -0.4 528,042 - GFF2468 0.22 -0.6 528,257 + GFF2468 0.31 -0.5 528,258 - GFF2468 0.31 -0.2 528,263 + GFF2468 0.31 -0.6 528,264 - GFF2468 0.31 -0.1 528,264 - GFF2468 0.31 -1.5 528,285 - GFF2468 0.32 +0.1 528,285 - GFF2468 0.32 -0.2 528,285 - GFF2468 0.32 -0.1 528,314 + GFF2468 0.33 +2.8 528,405 - GFF2468 0.37 -0.1 528,405 - GFF2468 0.37 -1.5 528,405 - GFF2468 0.37 -0.2 528,422 + GFF2468 0.37 -0.4 528,422 + GFF2468 0.37 +0.6 528,423 - GFF2468 0.37 -0.1 528,423 - GFF2468 0.37 +2.0 528,423 - GFF2468 0.37 -0.4 528,423 - GFF2468 0.37 +0.7 528,485 + GFF2468 0.40 +2.1 528,485 + GFF2468 0.40 -0.7
Or see this region's nucleotide sequence