Strain Fitness in Variovorax sp. SCN45 around GFF2465

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
525,072	+		GFF2464	0.63	+0.2
525,073	-		GFF2464	0.63	+0.6
525,073	-		GFF2464	0.63	+1.1
525,073	-		GFF2464	0.63	-1.0
525,073	-		GFF2464	0.63	-0.1
525,255	+		GFF2464	0.73	+1.5
525,262	-		GFF2464	0.73	+1.6
525,393	+		GFF2464	0.81	-0.4
525,393	+		GFF2464	0.81	+0.7
525,453	+		GFF2464	0.84	-1.1
525,453	+		GFF2464	0.84	+0.9
526,069	+		GFF2466	0.17	-0.6
526,069	+		GFF2466	0.17	+0.2
526,069	+		GFF2466	0.17	-0.4
526,070	-		GFF2466	0.17	+0.1
526,070	-		GFF2466	0.17	+0.2
526,070	-		GFF2466	0.17	-1.0
526,217	-		GFF2466	0.34	-0.2
526,445	-		GFF2466	0.60	-0.7
526,564	+		GFF2466	0.74	+0.9