Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2433 and GFF2434 are separated by 81 nucleotides GFF2434 and GFF2435 overlap by 4 nucleotides
GFF2433 - Putative OMR family iron-siderophore receptor precursor, at 482,760 to 485,210
GFF2433
GFF2434 - no description, at 485,292 to 485,588
GFF2434
GFF2435 - FIG138928: iron-regulated membrane protein, at 485,585 to 487,261
GFF2435
Position (kb) 485
486 Strain fitness (log2 ratio) -2
-1
0
1
2 at 484.299 kb on + strand, within GFF2433 at 484.300 kb on - strand, within GFF2433 at 484.383 kb on + strand, within GFF2433 at 484.383 kb on + strand, within GFF2433 at 484.383 kb on + strand, within GFF2433 at 484.515 kb on + strand, within GFF2433 at 484.515 kb on + strand, within GFF2433 at 484.515 kb on + strand, within GFF2433 at 484.516 kb on - strand, within GFF2433 at 484.516 kb on - strand, within GFF2433 at 484.534 kb on - strand, within GFF2433 at 484.534 kb on - strand, within GFF2433 at 484.534 kb on - strand, within GFF2433 at 484.551 kb on + strand, within GFF2433 at 484.551 kb on + strand, within GFF2433 at 484.551 kb on + strand, within GFF2433 at 484.552 kb on - strand, within GFF2433 at 484.552 kb on - strand, within GFF2433 at 484.579 kb on - strand, within GFF2433 at 484.599 kb on + strand, within GFF2433 at 484.599 kb on + strand, within GFF2433 at 484.600 kb on - strand, within GFF2433 at 484.600 kb on - strand, within GFF2433 at 484.600 kb on - strand, within GFF2433 at 484.626 kb on + strand, within GFF2433 at 484.626 kb on + strand, within GFF2433 at 484.627 kb on - strand, within GFF2433 at 484.628 kb on - strand, within GFF2433 at 484.670 kb on + strand, within GFF2433 at 484.670 kb on + strand, within GFF2433 at 484.708 kb on + strand, within GFF2433 at 484.758 kb on + strand, within GFF2433 at 484.758 kb on + strand, within GFF2433 at 484.759 kb on - strand, within GFF2433 at 484.759 kb on - strand, within GFF2433 at 484.761 kb on + strand, within GFF2433 at 484.762 kb on - strand, within GFF2433 at 484.762 kb on - strand, within GFF2433 at 484.762 kb on - strand, within GFF2433 at 484.762 kb on - strand, within GFF2433 at 484.929 kb on + strand, within GFF2433 at 484.930 kb on - strand, within GFF2433 at 484.995 kb on + strand at 484.995 kb on + strand at 484.995 kb on + strand at 484.996 kb on - strand at 484.996 kb on - strand at 484.998 kb on + strand at 484.998 kb on + strand at 485.004 kb on + strand at 485.005 kb on - strand at 485.134 kb on - strand at 485.134 kb on - strand at 485.134 kb on - strand at 485.136 kb on + strand at 485.136 kb on + strand at 485.136 kb on + strand at 485.160 kb on + strand at 485.160 kb on + strand at 485.160 kb on + strand at 485.161 kb on - strand at 485.164 kb on - strand at 485.199 kb on + strand at 485.199 kb on + strand at 485.199 kb on + strand at 485.200 kb on - strand at 485.200 kb on - strand at 485.249 kb on + strand at 485.249 kb on + strand at 485.249 kb on + strand at 485.249 kb on + strand at 485.250 kb on - strand at 485.250 kb on - strand at 485.250 kb on - strand at 485.250 kb on - strand at 485.638 kb on + strand at 485.638 kb on + strand at 485.638 kb on + strand at 485.639 kb on - strand at 485.639 kb on - strand at 485.639 kb on - strand at 485.639 kb on - strand at 485.639 kb on - strand at 485.639 kb on - strand at 485.843 kb on + strand, within GFF2435 at 485.843 kb on + strand, within GFF2435 at 485.843 kb on + strand, within GFF2435 at 485.844 kb on - strand, within GFF2435 at 485.844 kb on - strand, within GFF2435 at 485.844 kb on - strand, within GFF2435 at 485.844 kb on - strand, within GFF2435 at 485.844 kb on - strand, within GFF2435 at 485.924 kb on + strand, within GFF2435 at 485.924 kb on + strand, within GFF2435 at 485.925 kb on - strand, within GFF2435 at 485.948 kb on + strand, within GFF2435 at 485.948 kb on + strand, within GFF2435 at 486.062 kb on + strand, within GFF2435 at 486.062 kb on + strand, within GFF2435 at 486.269 kb on + strand, within GFF2435 at 486.521 kb on + strand, within GFF2435 at 486.521 kb on + strand, within GFF2435 at 486.522 kb on - strand, within GFF2435
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 484,299 + GFF2433 0.63 -1.0 484,300 - GFF2433 0.63 -0.2 484,383 + GFF2433 0.66 -0.8 484,383 + GFF2433 0.66 -0.0 484,383 + GFF2433 0.66 -0.2 484,515 + GFF2433 0.72 -0.1 484,515 + GFF2433 0.72 -0.4 484,515 + GFF2433 0.72 -0.9 484,516 - GFF2433 0.72 +0.3 484,516 - GFF2433 0.72 -0.4 484,534 - GFF2433 0.72 +0.0 484,534 - GFF2433 0.72 -1.0 484,534 - GFF2433 0.72 -0.2 484,551 + GFF2433 0.73 -0.2 484,551 + GFF2433 0.73 -1.1 484,551 + GFF2433 0.73 -0.1 484,552 - GFF2433 0.73 -0.0 484,552 - GFF2433 0.73 +0.1 484,579 - GFF2433 0.74 -1.2 484,599 + GFF2433 0.75 -0.2 484,599 + GFF2433 0.75 -0.1 484,600 - GFF2433 0.75 +0.3 484,600 - GFF2433 0.75 +0.8 484,600 - GFF2433 0.75 +1.1 484,626 + GFF2433 0.76 -0.1 484,626 + GFF2433 0.76 +0.1 484,627 - GFF2433 0.76 -0.2 484,628 - GFF2433 0.76 +0.5 484,670 + GFF2433 0.78 +0.3 484,670 + GFF2433 0.78 -1.7 484,708 + GFF2433 0.79 -0.5 484,758 + GFF2433 0.82 +2.2 484,758 + GFF2433 0.82 -0.5 484,759 - GFF2433 0.82 -1.4 484,759 - GFF2433 0.82 -1.1 484,761 + GFF2433 0.82 -0.4 484,762 - GFF2433 0.82 -0.8 484,762 - GFF2433 0.82 -0.7 484,762 - GFF2433 0.82 -0.8 484,762 - GFF2433 0.82 -1.4 484,929 + GFF2433 0.88 -0.2 484,930 - GFF2433 0.89 -0.2 484,995 + -1.7 484,995 + +0.0 484,995 + -2.1 484,996 - +1.9 484,996 - -0.4 484,998 + -0.1 484,998 + +0.2 485,004 + -1.9 485,005 - -0.7 485,134 - -0.2 485,134 - -1.2 485,134 - -0.0 485,136 + -0.4 485,136 + -0.0 485,136 + -0.6 485,160 + +0.4 485,160 + +0.3 485,160 + -0.6 485,161 - -0.2 485,164 - -1.2 485,199 + -1.5 485,199 + +0.0 485,199 + -1.2 485,200 - -1.1 485,200 - +0.4 485,249 + +0.1 485,249 + -0.3 485,249 + -0.9 485,249 + -0.5 485,250 - -1.2 485,250 - -0.5 485,250 - +1.1 485,250 - -0.1 485,638 + +0.5 485,638 + +1.1 485,638 + +1.2 485,639 - -0.7 485,639 - -0.1 485,639 - +0.3 485,639 - -0.3 485,639 - -0.2 485,639 - +0.4 485,843 + GFF2435 0.15 -0.5 485,843 + GFF2435 0.15 -0.2 485,843 + GFF2435 0.15 -0.7 485,844 - GFF2435 0.15 -0.4 485,844 - GFF2435 0.15 +0.1 485,844 - GFF2435 0.15 -1.4 485,844 - GFF2435 0.15 -0.8 485,844 - GFF2435 0.15 +1.1 485,924 + GFF2435 0.20 -0.1 485,924 + GFF2435 0.20 -1.2 485,925 - GFF2435 0.20 +0.3 485,948 + GFF2435 0.22 -0.5 485,948 + GFF2435 0.22 +0.0 486,062 + GFF2435 0.28 +0.1 486,062 + GFF2435 0.28 +0.6 486,269 + GFF2435 0.41 -0.8 486,521 + GFF2435 0.56 +0.3 486,521 + GFF2435 0.56 +0.2 486,522 - GFF2435 0.56 -0.0
Or see this region's nucleotide sequence