Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2373 and GFF2374 are separated by 336 nucleotides GFF2374 and GFF2375 are separated by 22 nucleotides GFF2375 and GFF2376 are separated by 93 nucleotides GFF2376 and GFF2377 are separated by 39 nucleotides GFF2377 and GFF2378 are separated by 11 nucleotides
GFF2373 - Transcriptional regulator, LysR family, at 427,442 to 428,368
GFF2373
GFF2374 - Transcription elongation factor GreB, at 428,705 to 429,280
GFF2374
GFF2375 - Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II, at 429,303 to 431,558
GFF2375
GFF2376 - DNA-directed RNA polymerase omega subunit (EC 2.7.7.6), at 431,652 to 431,855
GFF2376
GFF2377 - Guanylate kinase (EC 2.7.4.8), at 431,895 to 432,515
GFF2377
GFF2378 - UPF0701 protein YicC, at 432,527 to 433,450
GFF2378
Position (kb) 429
430
431
432 Strain fitness (log2 ratio) -2
-1
0
1
2 at 428.326 kb on + strand at 428.326 kb on + strand at 428.326 kb on + strand at 428.326 kb on + strand at 428.327 kb on - strand at 428.327 kb on - strand at 428.327 kb on - strand at 428.327 kb on - strand at 428.364 kb on + strand at 428.364 kb on + strand at 428.366 kb on + strand at 428.387 kb on + strand at 428.387 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.405 kb on + strand at 428.406 kb on - strand at 428.413 kb on + strand at 428.413 kb on + strand at 428.413 kb on + strand at 428.557 kb on + strand at 428.557 kb on + strand at 428.557 kb on + strand at 428.557 kb on + strand at 428.558 kb on - strand at 428.559 kb on + strand at 428.560 kb on - strand at 428.560 kb on - strand at 428.560 kb on - strand at 428.560 kb on - strand at 428.581 kb on - strand at 428.581 kb on - strand at 428.594 kb on - strand at 428.594 kb on - strand at 428.594 kb on - strand at 428.594 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.599 kb on - strand at 428.607 kb on - strand at 428.607 kb on - strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.651 kb on + strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.652 kb on - strand at 428.742 kb on + strand at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.798 kb on + strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.799 kb on - strand, within GFF2374 at 428.817 kb on - strand, within GFF2374 at 428.927 kb on + strand, within GFF2374 at 428.927 kb on + strand, within GFF2374 at 428.928 kb on - strand, within GFF2374 at 428.928 kb on - strand, within GFF2374 at 428.928 kb on - strand, within GFF2374 at 428.928 kb on - strand, within GFF2374 at 428.928 kb on - strand, within GFF2374 at 428.928 kb on - strand, within GFF2374 at 428.934 kb on - strand, within GFF2374 at 428.934 kb on - strand, within GFF2374 at 429.065 kb on + strand, within GFF2374 at 429.065 kb on + strand, within GFF2374 at 429.065 kb on + strand, within GFF2374 at 429.066 kb on - strand, within GFF2374 at 430.462 kb on + strand, within GFF2375 at 430.664 kb on - strand, within GFF2375 at 430.900 kb on + strand, within GFF2375 at 430.987 kb on + strand, within GFF2375 at 431.350 kb on + strand at 431.562 kb on + strand at 431.563 kb on - strand at 431.602 kb on + strand at 431.602 kb on + strand at 431.602 kb on + strand at 431.603 kb on - strand at 431.782 kb on + strand, within GFF2376 at 431.782 kb on + strand, within GFF2376
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 428,326 + -1.5 428,326 + +0.6 428,326 + +0.9 428,326 + -0.0 428,327 - -0.5 428,327 - -0.7 428,327 - -0.4 428,327 - +0.8 428,364 + -0.3 428,364 + +0.0 428,366 + +0.2 428,387 + -0.9 428,387 + -0.4 428,405 + -0.4 428,405 + +0.2 428,405 + -1.5 428,405 + +1.7 428,405 + +0.1 428,405 + -0.5 428,405 + +0.8 428,405 + -0.5 428,405 + +0.1 428,405 + +0.3 428,405 + +0.2 428,405 + -0.1 428,405 + -0.6 428,406 - +2.2 428,413 + +0.3 428,413 + -0.4 428,413 + +1.1 428,557 + +0.0 428,557 + +0.2 428,557 + -0.3 428,557 + +1.0 428,558 - -0.2 428,559 + +1.1 428,560 - -1.0 428,560 - +0.0 428,560 - +0.8 428,560 - +0.9 428,581 - -0.3 428,581 - +0.9 428,594 - +1.1 428,594 - -0.9 428,594 - -0.0 428,594 - +0.1 428,599 - -0.1 428,599 - -0.8 428,599 - +0.0 428,599 - -0.1 428,599 - -0.2 428,599 - -1.5 428,599 - -0.1 428,599 - +0.4 428,599 - -0.4 428,599 - +0.3 428,607 - +2.0 428,607 - -0.4 428,651 + +0.2 428,651 + -0.6 428,651 + -0.6 428,651 + +0.2 428,651 + -0.4 428,651 + -0.4 428,651 + -0.7 428,651 + -1.0 428,651 + -0.7 428,652 - -0.7 428,652 - -0.8 428,652 - -0.0 428,652 - -0.0 428,652 - -0.3 428,652 - -0.3 428,652 - -0.2 428,652 - -0.4 428,652 - -1.5 428,652 - +0.1 428,742 + +0.1 428,798 + GFF2374 0.16 -0.7 428,798 + GFF2374 0.16 -0.2 428,798 + GFF2374 0.16 +0.4 428,798 + GFF2374 0.16 -1.0 428,798 + GFF2374 0.16 +0.1 428,798 + GFF2374 0.16 -0.3 428,798 + GFF2374 0.16 -1.6 428,798 + GFF2374 0.16 -0.5 428,798 + GFF2374 0.16 -0.0 428,799 - GFF2374 0.16 -1.5 428,799 - GFF2374 0.16 +0.4 428,799 - GFF2374 0.16 +0.5 428,799 - GFF2374 0.16 +1.0 428,799 - GFF2374 0.16 +1.3 428,799 - GFF2374 0.16 +0.4 428,799 - GFF2374 0.16 +0.0 428,799 - GFF2374 0.16 -0.5 428,799 - GFF2374 0.16 -1.8 428,817 - GFF2374 0.19 -0.3 428,927 + GFF2374 0.39 +0.1 428,927 + GFF2374 0.39 +0.3 428,928 - GFF2374 0.39 -0.2 428,928 - GFF2374 0.39 -0.3 428,928 - GFF2374 0.39 -0.6 428,928 - GFF2374 0.39 -0.2 428,928 - GFF2374 0.39 +0.3 428,928 - GFF2374 0.39 -0.6 428,934 - GFF2374 0.40 +0.1 428,934 - GFF2374 0.40 +0.4 429,065 + GFF2374 0.62 -0.3 429,065 + GFF2374 0.62 -0.2 429,065 + GFF2374 0.62 +0.3 429,066 - GFF2374 0.63 -0.6 430,462 + GFF2375 0.51 +0.2 430,664 - GFF2375 0.60 -1.2 430,900 + GFF2375 0.71 +0.3 430,987 + GFF2375 0.75 -0.3 431,350 + -0.9 431,562 + -1.3 431,563 - -0.9 431,602 + +1.7 431,602 + -0.7 431,602 + -0.1 431,603 - -0.5 431,782 + GFF2376 0.64 -1.7 431,782 + GFF2376 0.64 +2.3
Or see this region's nucleotide sequence