Strain Fitness in Variovorax sp. SCN45 around GFF224

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
251,470	-				-0.0
251,521	-				-0.0
251,521	-				+0.9
251,521	-				-0.5
251,521	-				+0.1
251,546	-				+0.9
251,546	-				-0.3
251,546	-				+0.7
251,546	-				-0.4
251,546	-				-0.5
251,546	-				-0.7
251,546	-				-0.0
251,546	-				-0.1
251,546	-				-0.1
251,546	-				-0.1
251,571	-				+1.7
251,603	-				+0.4
251,603	-				-0.8
251,603	-				+0.4
251,603	-				-0.1
251,603	-				+0.6
251,608	-				-0.6
251,608	-				-0.6
251,608	-				-0.3
251,608	-				+0.3
251,619	-				+0.6
251,649	-				-0.6
251,649	-				-1.4
251,649	-				-0.8
251,649	-				-0.5
251,685	-				-0.6
251,685	-				-0.5
251,685	-				-0.6
251,685	-				-0.9
251,800	-		GFF225	0.13	-0.3
251,815	-		GFF225	0.15	-0.9
251,815	-		GFF225	0.15	-0.8
251,815	-		GFF225	0.15	-0.6
251,815	-		GFF225	0.15	-1.2
251,980	-		GFF225	0.28	+1.0
251,980	-		GFF225	0.28	-0.7
252,079	-		GFF225	0.37	-0.3
252,140	-		GFF225	0.42	+0.0
252,140	-		GFF225	0.42	+0.5
252,148	-		GFF225	0.43	-1.1
252,148	-		GFF225	0.43	+0.5
252,148	-		GFF225	0.43	-0.4
252,148	-		GFF225	0.43	-0.2
252,148	-		GFF225	0.43	-0.2
252,169	-		GFF225	0.44	-1.5
252,411	+		GFF225	0.64	-1.6
252,411	+		GFF225	0.64	-0.6
252,412	-		GFF225	0.65	+0.3
252,412	-		GFF225	0.65	-0.4
252,412	-		GFF225	0.65	-0.1
252,412	-		GFF225	0.65	-1.4
252,412	-		GFF225	0.65	-0.4
252,412	-		GFF225	0.65	+0.1