Strain Fitness in Variovorax sp. SCN45 around GFF2176

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
230,465	+		GFF2175	0.80	-0.3
230,466	-		GFF2175	0.80	+0.4
230,466	-		GFF2175	0.80	-0.8
230,466	-		GFF2175	0.80	-0.2
230,466	-		GFF2175	0.80	+0.7
230,720	+				-0.3
230,879	+				+0.1
230,880	-				+0.1
230,880	-				-0.6
231,109	-		GFF2176	0.31	+0.8
231,288	+				+0.1
231,289	-				+0.1
231,289	-				+0.1
231,291	+				-0.2
231,449	+		GFF2177	0.39	-0.4
231,450	-		GFF2177	0.39	+1.2
231,450	-		GFF2177	0.39	-2.2
231,450	-		GFF2177	0.39	+0.7