Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2173 and GFF2174 overlap by 4 nucleotides GFF2174 and GFF2175 are separated by 19 nucleotides
GFF2173 - no description, at 227,315 to 228,502
GFF2173
GFF2174 - hypothetical protein, at 228,499 to 229,212
GFF2174
GFF2175 - hypothetical protein, at 229,232 to 230,764
GFF2175
Position (kb) 228
229
230 Strain fitness (log2 ratio) -1
0
1
2 at 227.883 kb on - strand, within GFF2173 at 228.338 kb on + strand, within GFF2173 at 228.339 kb on - strand, within GFF2173 at 228.339 kb on - strand, within GFF2173 at 228.827 kb on + strand, within GFF2174 at 229.281 kb on + strand at 229.282 kb on - strand at 229.500 kb on + strand, within GFF2175 at 229.500 kb on + strand, within GFF2175 at 229.501 kb on - strand, within GFF2175 at 229.501 kb on - strand, within GFF2175 at 229.602 kb on + strand, within GFF2175 at 229.602 kb on + strand, within GFF2175 at 229.603 kb on - strand, within GFF2175 at 229.603 kb on - strand, within GFF2175 at 229.603 kb on - strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.641 kb on + strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.642 kb on - strand, within GFF2175 at 229.726 kb on - strand, within GFF2175 at 229.726 kb on - strand, within GFF2175 at 229.766 kb on - strand, within GFF2175
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 227,883 - GFF2173 0.48 -0.0 228,338 + GFF2173 0.86 +1.4 228,339 - GFF2173 0.86 +1.4 228,339 - GFF2173 0.86 +0.1 228,827 + GFF2174 0.46 -0.1 229,281 + -1.5 229,282 - +0.0 229,500 + GFF2175 0.17 -0.0 229,500 + GFF2175 0.17 -0.1 229,501 - GFF2175 0.18 +1.1 229,501 - GFF2175 0.18 +0.1 229,602 + GFF2175 0.24 -0.3 229,602 + GFF2175 0.24 -1.1 229,603 - GFF2175 0.24 +0.4 229,603 - GFF2175 0.24 +1.4 229,603 - GFF2175 0.24 -0.1 229,641 + GFF2175 0.27 -0.0 229,641 + GFF2175 0.27 -0.3 229,641 + GFF2175 0.27 +0.5 229,641 + GFF2175 0.27 +0.0 229,641 + GFF2175 0.27 +0.1 229,641 + GFF2175 0.27 -0.6 229,641 + GFF2175 0.27 -0.1 229,641 + GFF2175 0.27 +0.1 229,641 + GFF2175 0.27 -0.1 229,641 + GFF2175 0.27 -0.5 229,642 - GFF2175 0.27 +0.5 229,642 - GFF2175 0.27 -0.7 229,642 - GFF2175 0.27 -1.1 229,642 - GFF2175 0.27 -0.6 229,642 - GFF2175 0.27 -1.3 229,642 - GFF2175 0.27 +0.3 229,642 - GFF2175 0.27 -0.1 229,642 - GFF2175 0.27 -0.1 229,642 - GFF2175 0.27 +2.7 229,642 - GFF2175 0.27 -1.0 229,726 - GFF2175 0.32 +0.9 229,726 - GFF2175 0.32 -0.1 229,766 - GFF2175 0.35 +0.3
Or see this region's nucleotide sequence