Strain Fitness in Variovorax sp. SCN45 around GFF18

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
18,990	+		GFF17	0.35	-0.7
19,213	+		GFF17	0.53	+0.6
19,285	+		GFF17	0.59	-1.0
19,892	-				-0.2
19,892	-				+1.2
20,026	+		GFF18	0.11	+0.2
20,500	+		GFF18	0.48	-1.8
20,500	+		GFF18	0.48	-1.6
20,500	+		GFF18	0.48	+0.2
20,501	-		GFF18	0.48	+0.4
21,273	+				-1.3
21,273	+				-0.2
21,274	-				-1.4
21,274	-				-0.5
21,293	+				-0.9
21,294	-				+0.7
21,994	-		GFF20	0.33	+0.2