Strain Fitness in Variovorax sp. SCN45 around GFF1787

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
447,374	+		GFF1786	0.53	+0.3
447,374	+		GFF1786	0.53	+0.5
447,374	+		GFF1786	0.53	-0.3
447,375	-		GFF1786	0.54	-0.4
447,375	-		GFF1786	0.54	-0.6
447,819	+		GFF1786	0.86	+0.4
448,165	+				-0.7
448,165	+				+0.1
448,166	-				+1.3
448,174	+				+0.4
448,174	+				-1.3
448,175	-				-2.1
448,175	-				-0.2
448,371	-				+0.4
448,474	+				-0.5
448,612	+				-0.5
448,612	+				+0.3
448,612	+				-0.2
448,613	-				-1.5
448,844	-				-0.8
448,942	+				+0.9
448,946	-				-0.1
448,946	-				+0.4