Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1733 and GFF1734 are separated by 39 nucleotides GFF1734 and GFF1735 are separated by 1 nucleotides GFF1735 and GFF1736 are separated by 85 nucleotides
GFF1733 - Cell wall-associated hydrolases (invasion-associated proteins), at 393,612 to 394,115
GFF1733
GFF1734 - no description, at 394,155 to 394,514
GFF1734
GFF1735 - no description, at 394,516 to 394,635
GFF1735
GFF1736 - 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases, at 394,721 to 396,010
GFF1736
Position (kb) 394
395 Strain fitness (log2 ratio) -1
0
1 at 393.540 kb on - strand at 393.540 kb on - strand at 393.540 kb on - strand at 393.801 kb on + strand, within GFF1733 at 393.858 kb on + strand, within GFF1733 at 393.858 kb on + strand, within GFF1733 at 393.859 kb on - strand, within GFF1733 at 393.864 kb on + strand, within GFF1733 at 393.865 kb on - strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.002 kb on + strand, within GFF1733 at 394.003 kb on - strand, within GFF1733 at 394.003 kb on - strand, within GFF1733 at 394.003 kb on - strand, within GFF1733 at 394.003 kb on - strand, within GFF1733 at 394.003 kb on - strand, within GFF1733 at 394.003 kb on - strand, within GFF1733 at 394.078 kb on - strand at 394.078 kb on - strand at 394.435 kb on + strand, within GFF1734 at 394.435 kb on + strand, within GFF1734 at 394.435 kb on + strand, within GFF1734 at 394.489 kb on + strand at 394.666 kb on - strand at 394.724 kb on + strand at 395.304 kb on + strand, within GFF1736 at 395.305 kb on - strand, within GFF1736 at 395.305 kb on - strand, within GFF1736 at 395.421 kb on + strand, within GFF1736 at 395.422 kb on - strand, within GFF1736
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 393,540 - -0.3 393,540 - -0.2 393,540 - -0.0 393,801 + GFF1733 0.38 -0.3 393,858 + GFF1733 0.49 -0.8 393,858 + GFF1733 0.49 -0.1 393,859 - GFF1733 0.49 +0.1 393,864 + GFF1733 0.50 -0.3 393,865 - GFF1733 0.50 +0.6 394,002 + GFF1733 0.77 +0.7 394,002 + GFF1733 0.77 -1.6 394,002 + GFF1733 0.77 -0.1 394,002 + GFF1733 0.77 -0.4 394,002 + GFF1733 0.77 -0.5 394,002 + GFF1733 0.77 +0.1 394,002 + GFF1733 0.77 -0.5 394,002 + GFF1733 0.77 -1.1 394,002 + GFF1733 0.77 +0.1 394,003 - GFF1733 0.78 +1.1 394,003 - GFF1733 0.78 +0.8 394,003 - GFF1733 0.78 -0.6 394,003 - GFF1733 0.78 -0.0 394,003 - GFF1733 0.78 -0.4 394,003 - GFF1733 0.78 +0.5 394,078 - +0.8 394,078 - +1.0 394,435 + GFF1734 0.78 -0.2 394,435 + GFF1734 0.78 +1.1 394,435 + GFF1734 0.78 +0.3 394,489 + +0.1 394,666 - -1.3 394,724 + +0.1 395,304 + GFF1736 0.45 -1.2 395,305 - GFF1736 0.45 -0.7 395,305 - GFF1736 0.45 -1.0 395,421 + GFF1736 0.54 -0.3 395,422 - GFF1736 0.54 -0.5
Or see this region's nucleotide sequence