Strain Fitness in Variovorax sp. SCN45 around GFF1670

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
315,168	+		GFF1669	0.32	-0.5
315,186	+		GFF1669	0.34	+0.1
315,186	+		GFF1669	0.34	-0.4
315,267	+		GFF1669	0.40	-0.2
315,268	-		GFF1669	0.40	-0.2
315,375	+		GFF1669	0.48	-0.6
315,376	-		GFF1669	0.48	-0.9
315,462	+		GFF1669	0.54	-0.0
315,462	+		GFF1669	0.54	+1.3
315,463	-		GFF1669	0.54	+0.4
315,463	-		GFF1669	0.54	-0.5
315,501	+		GFF1669	0.57	-0.4
315,502	-		GFF1669	0.57	-0.1
316,316	-		GFF1670	0.48	-0.9
316,316	-		GFF1670	0.48	-0.1
316,665	+				-0.6
316,666	-				-0.2
316,965	+		GFF1671	0.29	+0.4
316,992	+		GFF1671	0.32	-1.5
317,451	+		GFF1671	0.68	+0.0
317,451	+		GFF1671	0.68	-1.1
317,452	-		GFF1671	0.68	-0.8
317,452	-		GFF1671	0.68	-0.3
317,452	-		GFF1671	0.68	-0.4
317,565	+		GFF1671	0.77	+0.7
317,566	-		GFF1671	0.77	-0.3