Strain Fitness in Variovorax sp. SCN45 around GFF1541

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
137,936	+		GFF1539	0.49	-0.5
137,936	+		GFF1539	0.49	-0.5
137,936	+		GFF1539	0.49	-0.9
139,144	+				-0.3
139,144	+				+0.2
139,145	-				+0.6
139,145	-				-0.6
139,145	-				-0.3
139,835	-		GFF1542	0.66	-0.8
139,876	-		GFF1542	0.70	-0.2
139,876	-		GFF1542	0.70	+0.3
140,120	+				-0.2
140,120	+				+0.0
140,120	+				+0.1
140,121	-				-0.3
140,121	-				-0.8
140,121	-				-0.3
140,121	-				-0.3
140,121	-				+0.3
140,121	-				-1.5
140,121	-				+0.4
140,121	-				+0.3
140,121	-				+0.2