Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1381 and GFF1382 are separated by 198 nucleotides GFF1382 and GFF1383 are separated by 31 nucleotides GFF1383 and GFF1384 are separated by 3 nucleotides
GFF1381 - Peptidase M48, Ste24p, at 727,158 to 728,135
GFF1381
GFF1382 - Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein, at 728,334 to 729,131
GFF1382
GFF1383 - Hypothetical protein in cluster with At3g50560-like gene family, at 729,163 to 730,023
GFF1383
GFF1384 - Nitrilotriacetate monooxygenase component A (EC 1.14.13.-), at 730,027 to 731,358
GFF1384
Position (kb) 728
729
730 Strain fitness (log2 ratio) -1
0
1 at 727.428 kb on + strand, within GFF1381 at 727.546 kb on + strand, within GFF1381 at 727.546 kb on + strand, within GFF1381 at 727.547 kb on - strand, within GFF1381 at 727.597 kb on + strand, within GFF1381 at 727.597 kb on + strand, within GFF1381 at 727.598 kb on - strand, within GFF1381 at 727.598 kb on - strand, within GFF1381 at 727.600 kb on + strand, within GFF1381 at 727.600 kb on + strand, within GFF1381 at 727.600 kb on + strand, within GFF1381 at 727.600 kb on + strand, within GFF1381 at 727.600 kb on + strand, within GFF1381 at 727.600 kb on + strand, within GFF1381 at 727.601 kb on - strand, within GFF1381 at 727.601 kb on - strand, within GFF1381 at 727.601 kb on - strand, within GFF1381 at 727.601 kb on - strand, within GFF1381 at 727.720 kb on + strand, within GFF1381 at 727.721 kb on - strand, within GFF1381 at 727.927 kb on + strand, within GFF1381 at 727.927 kb on + strand, within GFF1381 at 727.927 kb on + strand, within GFF1381 at 727.928 kb on - strand, within GFF1381 at 727.993 kb on - strand, within GFF1381 at 728.032 kb on + strand, within GFF1381 at 728.033 kb on - strand, within GFF1381 at 728.033 kb on - strand, within GFF1381 at 728.139 kb on + strand at 728.173 kb on + strand at 728.174 kb on - strand at 728.272 kb on - strand at 728.272 kb on - strand at 728.290 kb on + strand at 728.291 kb on - strand at 728.314 kb on + strand at 728.314 kb on + strand at 728.314 kb on + strand at 728.315 kb on - strand at 728.315 kb on - strand at 728.315 kb on - strand at 728.316 kb on + strand at 728.316 kb on + strand at 728.316 kb on + strand at 728.317 kb on - strand at 728.317 kb on - strand at 729.230 kb on - strand at 729.230 kb on - strand at 729.230 kb on - strand at 729.262 kb on + strand, within GFF1383 at 729.262 kb on + strand, within GFF1383 at 729.263 kb on - strand, within GFF1383 at 729.263 kb on - strand, within GFF1383 at 729.263 kb on - strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.451 kb on + strand, within GFF1383 at 729.452 kb on - strand, within GFF1383 at 729.452 kb on - strand, within GFF1383 at 729.452 kb on - strand, within GFF1383 at 729.452 kb on - strand, within GFF1383 at 729.452 kb on - strand, within GFF1383 at 729.455 kb on - strand, within GFF1383 at 729.455 kb on - strand, within GFF1383 at 729.455 kb on - strand, within GFF1383 at 729.808 kb on + strand, within GFF1383 at 729.808 kb on + strand, within GFF1383 at 729.808 kb on + strand, within GFF1383 at 729.808 kb on + strand, within GFF1383 at 729.808 kb on + strand, within GFF1383 at 729.808 kb on + strand, within GFF1383 at 729.809 kb on - strand, within GFF1383 at 729.809 kb on - strand, within GFF1383 at 729.809 kb on - strand, within GFF1383 at 729.820 kb on + strand, within GFF1383 at 729.820 kb on + strand, within GFF1383 at 729.820 kb on + strand, within GFF1383 at 729.820 kb on + strand, within GFF1383 at 729.820 kb on + strand, within GFF1383 at 729.821 kb on - strand, within GFF1383 at 729.821 kb on - strand, within GFF1383 at 729.821 kb on - strand, within GFF1383 at 729.889 kb on + strand, within GFF1383 at 729.889 kb on + strand, within GFF1383 at 729.890 kb on - strand, within GFF1383 at 729.919 kb on + strand, within GFF1383 at 729.919 kb on + strand, within GFF1383
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 727,428 + GFF1381 0.28 -0.0 727,546 + GFF1381 0.40 -0.4 727,546 + GFF1381 0.40 +0.0 727,547 - GFF1381 0.40 -0.5 727,597 + GFF1381 0.45 +0.3 727,597 + GFF1381 0.45 -0.7 727,598 - GFF1381 0.45 -0.0 727,598 - GFF1381 0.45 +0.3 727,600 + GFF1381 0.45 +0.0 727,600 + GFF1381 0.45 +1.7 727,600 + GFF1381 0.45 -0.3 727,600 + GFF1381 0.45 +0.7 727,600 + GFF1381 0.45 -0.5 727,600 + GFF1381 0.45 +0.5 727,601 - GFF1381 0.45 +1.0 727,601 - GFF1381 0.45 -0.4 727,601 - GFF1381 0.45 +0.5 727,601 - GFF1381 0.45 -0.7 727,720 + GFF1381 0.57 -0.8 727,721 - GFF1381 0.58 -0.3 727,927 + GFF1381 0.79 -1.3 727,927 + GFF1381 0.79 +1.0 727,927 + GFF1381 0.79 +0.1 727,928 - GFF1381 0.79 -0.5 727,993 - GFF1381 0.85 -0.3 728,032 + GFF1381 0.89 +0.5 728,033 - GFF1381 0.89 -0.9 728,033 - GFF1381 0.89 -0.1 728,139 + -0.9 728,173 + +0.9 728,174 - +0.1 728,272 - +0.8 728,272 - +0.0 728,290 + -0.2 728,291 - +0.2 728,314 + +0.7 728,314 + -0.1 728,314 + -0.0 728,315 - -0.3 728,315 - -1.3 728,315 - +0.5 728,316 + -0.5 728,316 + -0.2 728,316 + -0.2 728,317 - -0.4 728,317 - -0.0 729,230 - -0.8 729,230 - +0.6 729,230 - -1.7 729,262 + GFF1383 0.11 +0.2 729,262 + GFF1383 0.11 +0.3 729,263 - GFF1383 0.12 -1.3 729,263 - GFF1383 0.12 +0.9 729,263 - GFF1383 0.12 -0.2 729,451 + GFF1383 0.33 +0.1 729,451 + GFF1383 0.33 -0.3 729,451 + GFF1383 0.33 +0.5 729,451 + GFF1383 0.33 -0.5 729,451 + GFF1383 0.33 -0.2 729,451 + GFF1383 0.33 +0.3 729,451 + GFF1383 0.33 +0.4 729,452 - GFF1383 0.34 +0.3 729,452 - GFF1383 0.34 +0.3 729,452 - GFF1383 0.34 +0.7 729,452 - GFF1383 0.34 -1.0 729,452 - GFF1383 0.34 -1.2 729,455 - GFF1383 0.34 +0.3 729,455 - GFF1383 0.34 -0.2 729,455 - GFF1383 0.34 +0.3 729,808 + GFF1383 0.75 -1.2 729,808 + GFF1383 0.75 -0.3 729,808 + GFF1383 0.75 +0.5 729,808 + GFF1383 0.75 -0.2 729,808 + GFF1383 0.75 -0.3 729,808 + GFF1383 0.75 +1.1 729,809 - GFF1383 0.75 -0.5 729,809 - GFF1383 0.75 -0.8 729,809 - GFF1383 0.75 +0.6 729,820 + GFF1383 0.76 +1.0 729,820 + GFF1383 0.76 -0.7 729,820 + GFF1383 0.76 -0.8 729,820 + GFF1383 0.76 -0.6 729,820 + GFF1383 0.76 +0.5 729,821 - GFF1383 0.76 +0.1 729,821 - GFF1383 0.76 +0.6 729,821 - GFF1383 0.76 +0.4 729,889 + GFF1383 0.84 +0.0 729,889 + GFF1383 0.84 -0.7 729,890 - GFF1383 0.84 -0.3 729,919 + GFF1383 0.88 -0.5 729,919 + GFF1383 0.88 +0.9
Or see this region's nucleotide sequence