Strain Fitness in Variovorax sp. SCN45 around GFF1189

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
505,602	+		GFF1187	0.86	+0.8
505,602	+		GFF1187	0.86	+0.3
505,603	-		GFF1187	0.87	+0.1
506,118	-		GFF1188	0.48	+0.2
506,118	-		GFF1188	0.48	+1.3
506,118	-		GFF1188	0.48	-0.1
506,118	-		GFF1188	0.48	-0.6
506,196	-		GFF1188	0.58	+0.2
506,196	-		GFF1188	0.58	+0.3
506,196	-		GFF1188	0.58	-0.7
506,628	-		GFF1189	0.33	-0.9
506,998	+		GFF1190	0.22	-1.4
506,999	-		GFF1190	0.22	+0.3
506,999	-		GFF1190	0.22	-0.1
506,999	-		GFF1190	0.22	+0.4
506,999	-		GFF1190	0.22	-0.3
507,109	+		GFF1190	0.32	-1.1
507,109	+		GFF1190	0.32	+0.9
507,110	-		GFF1190	0.32	+1.2