Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1126 and GFF1127 are separated by 115 nucleotides GFF1127 and GFF1128 are separated by 56 nucleotides GFF1128 and GFF1129 are separated by 120 nucleotides
GFF1126 - Metal transporter, ZIP family, at 441,915 to 442,835
GFF1126
GFF1127 - Aldehyde dehydrogenase (EC 1.2.1.3), at 442,951 to 444,384
GFF1127
GFF1128 - Alkyl hydroperoxide reductase subunit C-like protein, at 444,441 to 444,998
GFF1128
GFF1129 - Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC, at 445,119 to 446,693
GFF1129
Position (kb) 442
443
444
445 Strain fitness (log2 ratio) -2
-1
0
1
2 at 442.441 kb on + strand, within GFF1126 at 442.442 kb on - strand, within GFF1126 at 442.442 kb on - strand, within GFF1126 at 442.471 kb on - strand, within GFF1126 at 442.575 kb on + strand, within GFF1126 at 442.575 kb on + strand, within GFF1126 at 442.575 kb on + strand, within GFF1126 at 442.576 kb on - strand, within GFF1126 at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.816 kb on + strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.817 kb on - strand at 442.820 kb on + strand at 442.821 kb on - strand at 442.821 kb on - strand at 442.949 kb on + strand at 442.949 kb on + strand at 442.949 kb on + strand at 442.949 kb on + strand at 442.949 kb on + strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.950 kb on - strand at 442.952 kb on + strand at 442.952 kb on + strand at 442.952 kb on + strand at 442.952 kb on + strand at 442.953 kb on - strand at 442.953 kb on - strand at 442.953 kb on - strand at 442.953 kb on - strand at 442.994 kb on + strand at 442.994 kb on + strand at 442.994 kb on + strand at 442.995 kb on - strand at 442.995 kb on - strand at 443.078 kb on + strand at 443.078 kb on + strand at 443.078 kb on + strand at 443.079 kb on - strand at 443.079 kb on - strand at 443.079 kb on - strand at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.306 kb on + strand, within GFF1127 at 443.307 kb on - strand, within GFF1127 at 443.307 kb on - strand, within GFF1127 at 443.307 kb on - strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.507 kb on + strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.508 kb on - strand, within GFF1127 at 443.726 kb on - strand, within GFF1127 at 443.940 kb on - strand, within GFF1127 at 443.940 kb on - strand, within GFF1127 at 443.999 kb on + strand, within GFF1127 at 443.999 kb on + strand, within GFF1127 at 443.999 kb on + strand, within GFF1127 at 443.999 kb on + strand, within GFF1127 at 444.000 kb on - strand, within GFF1127 at 444.000 kb on - strand, within GFF1127 at 444.011 kb on + strand, within GFF1127 at 444.012 kb on - strand, within GFF1127 at 444.053 kb on + strand, within GFF1127 at 444.053 kb on + strand, within GFF1127 at 444.053 kb on + strand, within GFF1127 at 444.054 kb on - strand, within GFF1127 at 444.054 kb on - strand, within GFF1127 at 444.054 kb on - strand, within GFF1127 at 444.054 kb on - strand, within GFF1127 at 444.054 kb on - strand, within GFF1127 at 444.054 kb on - strand, within GFF1127 at 444.066 kb on - strand, within GFF1127 at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.371 kb on + strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.372 kb on - strand at 444.442 kb on + strand at 444.442 kb on + strand at 444.442 kb on + strand at 444.442 kb on + strand at 444.442 kb on + strand at 444.442 kb on + strand at 444.443 kb on - strand at 444.443 kb on - strand at 444.526 kb on + strand, within GFF1128 at 444.526 kb on + strand, within GFF1128 at 444.526 kb on + strand, within GFF1128 at 444.527 kb on - strand, within GFF1128 at 444.527 kb on - strand, within GFF1128 at 444.529 kb on + strand, within GFF1128 at 444.529 kb on + strand, within GFF1128 at 444.529 kb on + strand, within GFF1128 at 444.529 kb on + strand, within GFF1128 at 444.529 kb on + strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.530 kb on - strand, within GFF1128 at 444.532 kb on + strand, within GFF1128 at 444.532 kb on + strand, within GFF1128 at 444.532 kb on + strand, within GFF1128 at 444.533 kb on - strand, within GFF1128 at 444.562 kb on + strand, within GFF1128 at 444.562 kb on + strand, within GFF1128 at 444.562 kb on + strand, within GFF1128 at 444.563 kb on - strand, within GFF1128 at 444.563 kb on - strand, within GFF1128 at 444.563 kb on - strand, within GFF1128 at 444.563 kb on - strand, within GFF1128 at 444.563 kb on - strand, within GFF1128 at 444.563 kb on - strand, within GFF1128 at 444.814 kb on + strand, within GFF1128 at 444.814 kb on + strand, within GFF1128 at 444.814 kb on + strand, within GFF1128 at 444.814 kb on + strand, within GFF1128 at 444.814 kb on + strand, within GFF1128 at 444.814 kb on + strand, within GFF1128 at 444.815 kb on - strand, within GFF1128 at 444.815 kb on - strand, within GFF1128 at 444.815 kb on - strand, within GFF1128 at 444.815 kb on - strand, within GFF1128 at 444.815 kb on - strand, within GFF1128 at 444.856 kb on + strand, within GFF1128 at 444.856 kb on + strand, within GFF1128 at 445.031 kb on + strand at 445.032 kb on - strand at 445.032 kb on - strand at 445.076 kb on + strand at 445.077 kb on - strand at 445.077 kb on - strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.093 kb on + strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.094 kb on - strand at 445.135 kb on + strand at 445.135 kb on + strand at 445.135 kb on + strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.136 kb on - strand at 445.158 kb on - strand at 445.326 kb on + strand, within GFF1129 at 445.326 kb on + strand, within GFF1129 at 445.327 kb on - strand, within GFF1129 at 445.327 kb on - strand, within GFF1129 at 445.327 kb on - strand, within GFF1129
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 442,441 + GFF1126 0.57 -0.3 442,442 - GFF1126 0.57 -1.3 442,442 - GFF1126 0.57 -0.7 442,471 - GFF1126 0.60 +0.0 442,575 + GFF1126 0.72 +0.1 442,575 + GFF1126 0.72 -0.4 442,575 + GFF1126 0.72 +1.3 442,576 - GFF1126 0.72 -0.8 442,816 + +0.8 442,816 + -0.9 442,816 + -0.7 442,816 + -0.5 442,816 + +0.5 442,816 + +0.0 442,816 + -0.5 442,816 + -0.1 442,816 + -1.0 442,816 + +0.2 442,816 + -0.2 442,816 + -0.6 442,816 + +0.5 442,816 + +0.0 442,816 + +0.0 442,817 - +0.7 442,817 - -0.7 442,817 - -0.4 442,817 - -0.8 442,817 - +0.8 442,817 - -1.7 442,817 - +0.3 442,817 - -1.3 442,817 - +0.6 442,817 - +0.0 442,817 - -0.7 442,820 + -0.9 442,821 - +0.0 442,821 - +0.3 442,949 + -0.2 442,949 + +0.3 442,949 + -0.7 442,949 + +0.2 442,949 + -0.2 442,950 - -0.2 442,950 - +1.0 442,950 - +0.9 442,950 - -1.5 442,950 - +0.0 442,950 - -0.3 442,950 - +0.3 442,950 - +1.7 442,952 + +0.3 442,952 + +0.2 442,952 + +1.3 442,952 + -0.9 442,953 - -0.1 442,953 - -0.3 442,953 - -1.0 442,953 - -0.7 442,994 + -0.3 442,994 + -0.2 442,994 + +1.1 442,995 - +0.6 442,995 - +0.9 443,078 + +0.7 443,078 + +1.0 443,078 + +1.7 443,079 - +0.6 443,079 - +0.9 443,079 - +0.2 443,306 + GFF1127 0.25 +0.8 443,306 + GFF1127 0.25 -0.3 443,306 + GFF1127 0.25 +1.2 443,306 + GFF1127 0.25 +0.7 443,306 + GFF1127 0.25 +0.6 443,306 + GFF1127 0.25 +0.3 443,306 + GFF1127 0.25 +0.9 443,306 + GFF1127 0.25 +0.3 443,306 + GFF1127 0.25 +0.1 443,306 + GFF1127 0.25 -2.5 443,306 + GFF1127 0.25 +0.6 443,306 + GFF1127 0.25 +1.1 443,307 - GFF1127 0.25 +0.6 443,307 - GFF1127 0.25 -0.5 443,307 - GFF1127 0.25 +0.8 443,507 + GFF1127 0.39 +0.4 443,507 + GFF1127 0.39 +1.3 443,507 + GFF1127 0.39 +0.3 443,507 + GFF1127 0.39 +0.9 443,507 + GFF1127 0.39 +0.2 443,507 + GFF1127 0.39 +0.7 443,507 + GFF1127 0.39 +0.8 443,507 + GFF1127 0.39 +0.7 443,507 + GFF1127 0.39 +0.7 443,508 - GFF1127 0.39 +0.6 443,508 - GFF1127 0.39 +1.0 443,508 - GFF1127 0.39 +0.8 443,508 - GFF1127 0.39 +0.8 443,508 - GFF1127 0.39 +0.9 443,508 - GFF1127 0.39 +0.3 443,508 - GFF1127 0.39 -0.7 443,508 - GFF1127 0.39 -0.1 443,508 - GFF1127 0.39 +0.4 443,508 - GFF1127 0.39 +0.5 443,508 - GFF1127 0.39 +0.4 443,508 - GFF1127 0.39 +0.7 443,508 - GFF1127 0.39 +0.2 443,508 - GFF1127 0.39 +1.0 443,508 - GFF1127 0.39 +0.6 443,508 - GFF1127 0.39 +0.6 443,508 - GFF1127 0.39 +0.5 443,508 - GFF1127 0.39 +0.6 443,726 - GFF1127 0.54 +1.1 443,940 - GFF1127 0.69 +0.9 443,940 - GFF1127 0.69 +0.8 443,999 + GFF1127 0.73 +0.8 443,999 + GFF1127 0.73 +0.9 443,999 + GFF1127 0.73 -1.0 443,999 + GFF1127 0.73 -1.3 444,000 - GFF1127 0.73 +1.0 444,000 - GFF1127 0.73 +0.1 444,011 + GFF1127 0.74 +0.8 444,012 - GFF1127 0.74 +0.2 444,053 + GFF1127 0.77 +1.0 444,053 + GFF1127 0.77 +0.3 444,053 + GFF1127 0.77 -0.3 444,054 - GFF1127 0.77 -0.3 444,054 - GFF1127 0.77 +0.7 444,054 - GFF1127 0.77 +0.5 444,054 - GFF1127 0.77 +0.5 444,054 - GFF1127 0.77 +0.9 444,054 - GFF1127 0.77 +0.9 444,066 - GFF1127 0.78 +0.5 444,371 + -0.7 444,371 + +1.3 444,371 + +1.1 444,371 + +0.3 444,371 + +0.4 444,371 + +1.6 444,371 + +1.0 444,371 + +1.9 444,371 + +0.6 444,371 + +1.0 444,371 + +0.8 444,371 + +0.5 444,371 + +0.4 444,372 - +0.0 444,372 - +1.1 444,372 - +1.0 444,372 - +0.3 444,372 - +0.2 444,372 - +0.4 444,372 - +0.9 444,372 - +0.2 444,372 - +1.2 444,372 - +1.6 444,372 - +1.4 444,372 - +1.3 444,372 - +0.5 444,372 - +0.4 444,372 - -2.4 444,372 - +0.0 444,372 - +0.6 444,442 + -0.9 444,442 + -0.2 444,442 + -0.3 444,442 + +0.7 444,442 + -0.2 444,442 + -0.8 444,443 - -0.2 444,443 - -0.7 444,526 + GFF1128 0.15 +0.2 444,526 + GFF1128 0.15 +0.1 444,526 + GFF1128 0.15 +0.5 444,527 - GFF1128 0.15 +0.3 444,527 - GFF1128 0.15 -0.6 444,529 + GFF1128 0.16 +0.3 444,529 + GFF1128 0.16 -0.8 444,529 + GFF1128 0.16 -0.1 444,529 + GFF1128 0.16 +0.6 444,529 + GFF1128 0.16 +0.6 444,530 - GFF1128 0.16 +1.1 444,530 - GFF1128 0.16 +0.1 444,530 - GFF1128 0.16 +0.2 444,530 - GFF1128 0.16 -0.6 444,530 - GFF1128 0.16 -0.9 444,530 - GFF1128 0.16 -0.1 444,530 - GFF1128 0.16 +0.2 444,530 - GFF1128 0.16 -0.3 444,530 - GFF1128 0.16 -0.4 444,530 - GFF1128 0.16 +1.1 444,530 - GFF1128 0.16 -0.8 444,530 - GFF1128 0.16 +0.6 444,532 + GFF1128 0.16 -0.2 444,532 + GFF1128 0.16 +1.3 444,532 + GFF1128 0.16 -0.5 444,533 - GFF1128 0.16 -2.0 444,562 + GFF1128 0.22 -0.9 444,562 + GFF1128 0.22 -0.8 444,562 + GFF1128 0.22 -0.2 444,563 - GFF1128 0.22 -0.6 444,563 - GFF1128 0.22 -0.6 444,563 - GFF1128 0.22 -0.3 444,563 - GFF1128 0.22 -2.0 444,563 - GFF1128 0.22 +1.6 444,563 - GFF1128 0.22 -2.5 444,814 + GFF1128 0.67 +0.8 444,814 + GFF1128 0.67 -0.4 444,814 + GFF1128 0.67 +0.2 444,814 + GFF1128 0.67 +0.6 444,814 + GFF1128 0.67 +1.7 444,814 + GFF1128 0.67 -0.5 444,815 - GFF1128 0.67 +0.1 444,815 - GFF1128 0.67 +0.1 444,815 - GFF1128 0.67 -0.3 444,815 - GFF1128 0.67 +0.6 444,815 - GFF1128 0.67 +0.0 444,856 + GFF1128 0.74 -0.5 444,856 + GFF1128 0.74 -0.2 445,031 + +1.1 445,032 - -0.2 445,032 - +0.6 445,076 + -0.9 445,077 - -1.1 445,077 - +0.9 445,093 + -1.3 445,093 + -0.1 445,093 + +1.3 445,093 + +0.3 445,093 + -0.6 445,093 + -0.6 445,093 + +0.2 445,093 + -0.6 445,093 + +2.6 445,093 + -0.4 445,093 + -0.7 445,093 + +0.5 445,093 + +0.4 445,093 + -2.1 445,093 + +0.0 445,093 + -1.1 445,093 + -0.3 445,094 - -0.3 445,094 - +0.5 445,094 - +0.8 445,094 - -0.2 445,094 - -0.3 445,094 - -2.7 445,094 - -1.0 445,094 - -0.5 445,094 - +0.3 445,094 - -0.4 445,094 - +1.3 445,094 - +0.3 445,094 - -0.3 445,094 - +0.2 445,094 - +0.7 445,094 - +0.2 445,094 - -0.8 445,094 - +0.7 445,135 + -1.8 445,135 + -0.6 445,135 + -0.5 445,136 - +0.6 445,136 - -2.7 445,136 - +0.2 445,136 - -0.3 445,136 - -0.7 445,136 - -0.4 445,136 - +0.1 445,136 - -0.7 445,158 - +0.0 445,326 + GFF1129 0.13 -0.2 445,326 + GFF1129 0.13 +0.0 445,327 - GFF1129 0.13 -1.3 445,327 - GFF1129 0.13 -0.1 445,327 - GFF1129 0.13 +0.0
Or see this region's nucleotide sequence