Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1100 and GFF1101 are separated by 117 nucleotides GFF1101 and GFF1102 are separated by 181 nucleotides
GFF1100 - Probable inner membrane transmembrane protein, at 412,797 to 414,494
GFF1100
GFF1101 - LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-independent, at 414,612 to 414,881
GFF1101
GFF1102 - Uncharacterized oxidoreductase YdgJ, at 415,063 to 416,130
GFF1102
Position (kb) 414
415 Strain fitness (log2 ratio) -1
0
1
2 at 414.613 kb on + strand at 414.613 kb on + strand at 414.613 kb on + strand at 414.613 kb on + strand at 414.613 kb on + strand at 414.613 kb on + strand at 414.614 kb on - strand at 414.614 kb on - strand at 414.614 kb on - strand at 415.031 kb on - strand at 415.071 kb on + strand at 415.071 kb on + strand at 415.071 kb on + strand at 415.071 kb on + strand at 415.072 kb on - strand at 415.072 kb on - strand at 415.072 kb on - strand at 415.271 kb on + strand, within GFF1102 at 415.272 kb on - strand, within GFF1102 at 415.272 kb on - strand, within GFF1102 at 415.272 kb on - strand, within GFF1102 at 415.272 kb on - strand, within GFF1102 at 415.504 kb on + strand, within GFF1102 at 415.504 kb on + strand, within GFF1102 at 415.505 kb on - strand, within GFF1102 at 415.505 kb on - strand, within GFF1102 at 415.505 kb on - strand, within GFF1102 at 415.505 kb on - strand, within GFF1102 at 415.505 kb on - strand, within GFF1102 at 415.505 kb on - strand, within GFF1102 at 415.696 kb on + strand, within GFF1102 at 415.696 kb on + strand, within GFF1102 at 415.696 kb on + strand, within GFF1102 at 415.696 kb on + strand, within GFF1102 at 415.696 kb on + strand, within GFF1102 at 415.696 kb on + strand, within GFF1102 at 415.697 kb on - strand, within GFF1102 at 415.697 kb on - strand, within GFF1102 at 415.697 kb on - strand, within GFF1102 at 415.697 kb on - strand, within GFF1102 at 415.697 kb on - strand, within GFF1102 at 415.751 kb on + strand, within GFF1102 at 415.751 kb on + strand, within GFF1102 at 415.752 kb on - strand, within GFF1102 at 415.752 kb on - strand, within GFF1102 at 415.792 kb on + strand, within GFF1102 at 415.792 kb on + strand, within GFF1102 at 415.792 kb on + strand, within GFF1102 at 415.792 kb on + strand, within GFF1102 at 415.793 kb on - strand, within GFF1102 at 415.793 kb on - strand, within GFF1102 at 415.793 kb on - strand, within GFF1102 at 415.793 kb on - strand, within GFF1102 at 415.819 kb on + strand, within GFF1102 at 415.819 kb on + strand, within GFF1102 at 415.820 kb on - strand, within GFF1102
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 414,613 + +0.8 414,613 + +0.7 414,613 + -0.1 414,613 + +0.1 414,613 + -0.3 414,613 + +0.2 414,614 - +0.3 414,614 - -0.7 414,614 - -0.3 415,031 - -0.2 415,071 + -0.4 415,071 + +0.7 415,071 + +2.3 415,071 + -0.2 415,072 - +0.1 415,072 - -0.3 415,072 - -0.1 415,271 + GFF1102 0.19 +0.1 415,272 - GFF1102 0.20 -0.5 415,272 - GFF1102 0.20 +0.8 415,272 - GFF1102 0.20 +0.3 415,272 - GFF1102 0.20 -1.3 415,504 + GFF1102 0.41 -1.4 415,504 + GFF1102 0.41 +0.3 415,505 - GFF1102 0.41 +0.1 415,505 - GFF1102 0.41 +0.7 415,505 - GFF1102 0.41 +0.3 415,505 - GFF1102 0.41 +0.4 415,505 - GFF1102 0.41 -0.4 415,505 - GFF1102 0.41 -0.0 415,696 + GFF1102 0.59 +1.0 415,696 + GFF1102 0.59 +0.6 415,696 + GFF1102 0.59 +0.2 415,696 + GFF1102 0.59 +0.8 415,696 + GFF1102 0.59 +0.0 415,696 + GFF1102 0.59 +0.1 415,697 - GFF1102 0.59 +1.2 415,697 - GFF1102 0.59 +0.1 415,697 - GFF1102 0.59 +0.4 415,697 - GFF1102 0.59 -0.3 415,697 - GFF1102 0.59 +2.1 415,751 + GFF1102 0.64 -0.8 415,751 + GFF1102 0.64 -0.3 415,752 - GFF1102 0.65 +0.4 415,752 - GFF1102 0.65 +1.4 415,792 + GFF1102 0.68 -0.8 415,792 + GFF1102 0.68 -0.5 415,792 + GFF1102 0.68 -0.6 415,792 + GFF1102 0.68 +0.6 415,793 - GFF1102 0.68 +0.6 415,793 - GFF1102 0.68 +0.1 415,793 - GFF1102 0.68 -0.1 415,793 - GFF1102 0.68 +0.6 415,819 + GFF1102 0.71 +0.4 415,819 + GFF1102 0.71 -0.2 415,820 - GFF1102 0.71 -1.5
Or see this region's nucleotide sequence