Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1081 and GFF1082 are separated by 37 nucleotides
GFF1081 - hypothetical protein, at 391,125 to 392,807
GFF1081
GFF1082 - no description, at 392,845 to 393,060
GFF1082
Position (kb) 392
393
394 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 391.861 kb on + strand, within GFF1081 at 392.012 kb on + strand, within GFF1081 at 392.012 kb on + strand, within GFF1081 at 392.013 kb on - strand, within GFF1081 at 392.013 kb on - strand, within GFF1081 at 392.013 kb on - strand, within GFF1081 at 392.013 kb on - strand, within GFF1081 at 392.016 kb on + strand, within GFF1081 at 392.016 kb on + strand, within GFF1081 at 392.016 kb on + strand, within GFF1081 at 392.017 kb on - strand, within GFF1081 at 392.028 kb on + strand, within GFF1081 at 392.061 kb on + strand, within GFF1081 at 392.061 kb on + strand, within GFF1081 at 392.061 kb on + strand, within GFF1081 at 392.061 kb on + strand, within GFF1081 at 392.062 kb on - strand, within GFF1081 at 392.092 kb on + strand, within GFF1081 at 392.092 kb on + strand, within GFF1081 at 392.092 kb on + strand, within GFF1081 at 392.092 kb on + strand, within GFF1081 at 392.092 kb on + strand, within GFF1081 at 392.093 kb on - strand, within GFF1081 at 392.193 kb on + strand, within GFF1081 at 392.194 kb on - strand, within GFF1081 at 392.211 kb on + strand, within GFF1081 at 392.212 kb on - strand, within GFF1081 at 392.268 kb on + strand, within GFF1081 at 392.269 kb on - strand, within GFF1081 at 392.335 kb on + strand, within GFF1081 at 392.335 kb on + strand, within GFF1081 at 392.335 kb on + strand, within GFF1081 at 392.335 kb on + strand, within GFF1081 at 392.336 kb on - strand, within GFF1081 at 392.510 kb on + strand, within GFF1081 at 392.526 kb on + strand, within GFF1081 at 392.526 kb on + strand, within GFF1081 at 392.527 kb on - strand, within GFF1081 at 392.527 kb on - strand, within GFF1081 at 392.527 kb on - strand, within GFF1081 at 392.527 kb on - strand, within GFF1081 at 392.527 kb on - strand, within GFF1081 at 392.544 kb on + strand, within GFF1081 at 392.544 kb on + strand, within GFF1081 at 392.602 kb on - strand, within GFF1081 at 392.611 kb on - strand, within GFF1081 at 392.742 kb on + strand at 392.761 kb on + strand at 392.775 kb on - strand at 392.788 kb on + strand at 392.822 kb on + strand at 392.822 kb on + strand at 392.823 kb on - strand at 392.829 kb on - strand at 392.829 kb on - strand at 392.832 kb on + strand at 392.833 kb on - strand at 393.045 kb on + strand at 393.045 kb on + strand at 393.051 kb on + strand at 393.087 kb on + strand at 393.087 kb on + strand at 393.087 kb on + strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.088 kb on - strand at 393.134 kb on - strand at 393.172 kb on + strand at 393.172 kb on + strand at 393.172 kb on + strand at 393.172 kb on + strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.173 kb on - strand at 393.176 kb on + strand at 393.648 kb on + strand at 393.648 kb on + strand at 393.671 kb on - strand at 393.700 kb on - strand at 393.919 kb on + strand at 393.920 kb on - strand at 393.920 kb on - strand at 393.922 kb on + strand at 393.923 kb on - strand at 394.025 kb on + strand at 394.026 kb on - strand at 394.026 kb on - strand at 394.033 kb on + strand at 394.033 kb on + strand at 394.034 kb on - strand at 394.034 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL remove 391,861 + GFF1081 0.44 -1.0 392,012 + GFF1081 0.53 -1.0 392,012 + GFF1081 0.53 -0.2 392,013 - GFF1081 0.53 -0.4 392,013 - GFF1081 0.53 -0.3 392,013 - GFF1081 0.53 -1.1 392,013 - GFF1081 0.53 +0.7 392,016 + GFF1081 0.53 -0.5 392,016 + GFF1081 0.53 -1.4 392,016 + GFF1081 0.53 -0.3 392,017 - GFF1081 0.53 +1.0 392,028 + GFF1081 0.54 +0.3 392,061 + GFF1081 0.56 +0.2 392,061 + GFF1081 0.56 -0.0 392,061 + GFF1081 0.56 +0.7 392,061 + GFF1081 0.56 +0.1 392,062 - GFF1081 0.56 +2.3 392,092 + GFF1081 0.57 -0.1 392,092 + GFF1081 0.57 -0.6 392,092 + GFF1081 0.57 -0.3 392,092 + GFF1081 0.57 -1.2 392,092 + GFF1081 0.57 -0.7 392,093 - GFF1081 0.58 -0.6 392,193 + GFF1081 0.63 +0.2 392,194 - GFF1081 0.64 -0.3 392,211 + GFF1081 0.65 -0.3 392,212 - GFF1081 0.65 -0.3 392,268 + GFF1081 0.68 +1.1 392,269 - GFF1081 0.68 -0.6 392,335 + GFF1081 0.72 +0.0 392,335 + GFF1081 0.72 -2.5 392,335 + GFF1081 0.72 +0.3 392,335 + GFF1081 0.72 -0.8 392,336 - GFF1081 0.72 +0.1 392,510 + GFF1081 0.82 -0.6 392,526 + GFF1081 0.83 +0.5 392,526 + GFF1081 0.83 -0.8 392,527 - GFF1081 0.83 -0.5 392,527 - GFF1081 0.83 -2.2 392,527 - GFF1081 0.83 -0.4 392,527 - GFF1081 0.83 -0.8 392,527 - GFF1081 0.83 +1.9 392,544 + GFF1081 0.84 -0.8 392,544 + GFF1081 0.84 -0.4 392,602 - GFF1081 0.88 -0.2 392,611 - GFF1081 0.88 +0.2 392,742 + +0.2 392,761 + -0.1 392,775 - -0.9 392,788 + +0.6 392,822 + +0.3 392,822 + -0.2 392,823 - -0.7 392,829 - +0.2 392,829 - -0.3 392,832 + -0.4 392,833 - -0.4 393,045 + -0.3 393,045 + -0.3 393,051 + +0.2 393,087 + -0.7 393,087 + -0.0 393,087 + +0.3 393,088 - +1.8 393,088 - -0.6 393,088 - +1.8 393,088 - -0.3 393,088 - -1.9 393,088 - -0.9 393,088 - +0.4 393,088 - +0.2 393,088 - -0.9 393,134 - -0.0 393,172 + -0.2 393,172 + -0.1 393,172 + +0.1 393,172 + -0.3 393,173 - +0.9 393,173 - -0.3 393,173 - -0.9 393,173 - -0.1 393,173 - +0.8 393,173 - -0.0 393,173 - -0.1 393,173 - +0.3 393,176 + +0.5 393,648 + -0.2 393,648 + +0.6 393,671 - -0.1 393,700 - -0.4 393,919 + -0.2 393,920 - -1.1 393,920 - -1.5 393,922 + +0.3 393,923 - -0.6 394,025 + +0.1 394,026 - -0.4 394,026 - -2.9 394,033 + -0.2 394,033 + +0.7 394,034 - +0.2 394,034 - -0.7
Or see this region's nucleotide sequence