Strain Fitness in Variovorax sp. SCN45 around GFF105

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
132,323	+		GFF104	0.68	+0.2
132,324	-		GFF104	0.68	-1.3
132,620	+		GFF104	0.79	-0.6
132,621	-		GFF104	0.79	-0.0
132,621	-		GFF104	0.79	-0.6
132,621	-		GFF104	0.79	-0.2
132,621	-		GFF104	0.79	-0.6
132,621	-		GFF104	0.79	-0.8
132,621	-		GFF104	0.79	-1.5
132,621	-		GFF104	0.79	+0.2
132,621	-		GFF104	0.79	+0.2
132,722	+		GFF104	0.83	-0.0
133,192	+				-0.4
133,192	+				+0.1
133,193	-				-0.8
133,784	-				-0.0
133,930	-		GFF106	0.16	-0.4
134,087	+		GFF106	0.30	+0.7
134,088	-		GFF106	0.30	-0.1
134,166	+		GFF106	0.37	-1.2
134,166	+		GFF106	0.37	-0.4
134,167	-		GFF106	0.37	-0.4
134,338	+		GFF106	0.52	-0.1
134,440	+		GFF106	0.61	-0.8
134,440	+		GFF106	0.61	-0.7
134,440	+		GFF106	0.61	+1.6
134,723	+		GFF106	0.85	+1.6
134,723	+		GFF106	0.85	+1.2
134,723	+		GFF106	0.85	-0.4
134,723	+		GFF106	0.85	+0.1