Experiment: Fructose-6-phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS19600 and ABI39_RS19605 are separated by 31 nucleotides ABI39_RS19605 and ABI39_RS19610 overlap by 23 nucleotides ABI39_RS19610 and ABI39_RS19615 are separated by 26 nucleotides ABI39_RS19615 and ABI39_RS19620 are separated by 2 nucleotides
ABI39_RS19600: ABI39_RS19600 - hypothetical protein, at 4,877,290 to 4,877,997
_RS19600
ABI39_RS19605: ABI39_RS19605 - hypothetical protein, at 4,878,029 to 4,878,445
_RS19605
ABI39_RS19610: ABI39_RS19610 - hypothetical protein, at 4,878,423 to 4,878,890
_RS19610
ABI39_RS19615: ABI39_RS19615 - hypothetical protein, at 4,878,917 to 4,879,180
_RS19615
ABI39_RS19620: ABI39_RS19620 - hypothetical protein, at 4,879,183 to 4,880,358
_RS19620
Position (kb) 4878
4879 Strain fitness (log2 ratio) -2
-1
0
1 at 4877.565 kb on + strand, within ABI39_RS19600 at 4877.754 kb on + strand, within ABI39_RS19600 at 4877.772 kb on - strand, within ABI39_RS19600 at 4877.823 kb on + strand, within ABI39_RS19600 at 4877.842 kb on + strand, within ABI39_RS19600 at 4877.843 kb on - strand, within ABI39_RS19600 at 4877.843 kb on - strand, within ABI39_RS19600 at 4877.843 kb on - strand, within ABI39_RS19600 at 4877.846 kb on + strand, within ABI39_RS19600 at 4877.847 kb on - strand, within ABI39_RS19600 at 4877.868 kb on + strand, within ABI39_RS19600 at 4877.870 kb on + strand, within ABI39_RS19600 at 4877.883 kb on + strand, within ABI39_RS19600 at 4877.931 kb on + strand at 4877.935 kb on + strand at 4877.936 kb on - strand at 4877.936 kb on - strand at 4878.006 kb on + strand at 4878.015 kb on + strand at 4878.116 kb on - strand, within ABI39_RS19605 at 4878.148 kb on + strand, within ABI39_RS19605 at 4878.158 kb on + strand, within ABI39_RS19605 at 4878.230 kb on - strand, within ABI39_RS19605 at 4878.276 kb on + strand, within ABI39_RS19605 at 4878.276 kb on + strand, within ABI39_RS19605 at 4878.276 kb on + strand, within ABI39_RS19605 at 4878.289 kb on + strand, within ABI39_RS19605 at 4878.289 kb on + strand, within ABI39_RS19605 at 4878.408 kb on - strand at 4878.502 kb on - strand, within ABI39_RS19610 at 4878.512 kb on + strand, within ABI39_RS19610 at 4878.527 kb on + strand, within ABI39_RS19610 at 4878.527 kb on + strand, within ABI39_RS19610 at 4878.534 kb on - strand, within ABI39_RS19610 at 4878.611 kb on - strand, within ABI39_RS19610 at 4878.627 kb on - strand, within ABI39_RS19610 at 4878.654 kb on - strand, within ABI39_RS19610 at 4878.663 kb on - strand, within ABI39_RS19610 at 4878.786 kb on - strand, within ABI39_RS19610 at 4878.793 kb on - strand, within ABI39_RS19610 at 4878.929 kb on + strand at 4878.965 kb on + strand, within ABI39_RS19615 at 4879.034 kb on + strand, within ABI39_RS19615 at 4879.403 kb on + strand, within ABI39_RS19620 at 4879.426 kb on + strand, within ABI39_RS19620 at 4879.508 kb on + strand, within ABI39_RS19620 at 4879.508 kb on + strand, within ABI39_RS19620 at 4879.511 kb on + strand, within ABI39_RS19620 at 4879.551 kb on + strand, within ABI39_RS19620 at 4879.553 kb on + strand, within ABI39_RS19620 at 4879.596 kb on - strand, within ABI39_RS19620 at 4879.614 kb on + strand, within ABI39_RS19620 at 4879.693 kb on - strand, within ABI39_RS19620 at 4879.710 kb on + strand, within ABI39_RS19620 at 4879.710 kb on + strand, within ABI39_RS19620 at 4879.797 kb on + strand, within ABI39_RS19620 at 4879.882 kb on + strand, within ABI39_RS19620 at 4879.884 kb on + strand, within ABI39_RS19620 at 4879.884 kb on + strand, within ABI39_RS19620 at 4879.888 kb on + strand, within ABI39_RS19620
Per-strain Table
Position Strand Gene LocusTag Fraction Fructose-6-phosphate (C) remove 4,877,565 + ABI39_RS19600 0.39 +0.4 4,877,754 + ABI39_RS19600 0.66 -0.3 4,877,772 - ABI39_RS19600 0.68 -0.4 4,877,823 + ABI39_RS19600 0.75 +1.1 4,877,842 + ABI39_RS19600 0.78 +1.0 4,877,843 - ABI39_RS19600 0.78 +0.5 4,877,843 - ABI39_RS19600 0.78 +0.2 4,877,843 - ABI39_RS19600 0.78 -0.5 4,877,846 + ABI39_RS19600 0.79 -0.1 4,877,847 - ABI39_RS19600 0.79 +0.8 4,877,868 + ABI39_RS19600 0.82 -0.3 4,877,870 + ABI39_RS19600 0.82 -1.4 4,877,883 + ABI39_RS19600 0.84 +0.2 4,877,931 + +0.8 4,877,935 + +0.4 4,877,936 - -0.5 4,877,936 - +0.2 4,878,006 + -0.1 4,878,015 + +0.4 4,878,116 - ABI39_RS19605 0.21 -0.7 4,878,148 + ABI39_RS19605 0.29 +0.2 4,878,158 + ABI39_RS19605 0.31 -0.4 4,878,230 - ABI39_RS19605 0.48 +0.5 4,878,276 + ABI39_RS19605 0.59 +0.3 4,878,276 + ABI39_RS19605 0.59 +0.4 4,878,276 + ABI39_RS19605 0.59 +0.3 4,878,289 + ABI39_RS19605 0.62 -1.4 4,878,289 + ABI39_RS19605 0.62 +0.2 4,878,408 - +0.7 4,878,502 - ABI39_RS19610 0.17 -1.8 4,878,512 + ABI39_RS19610 0.19 +0.1 4,878,527 + ABI39_RS19610 0.22 +1.7 4,878,527 + ABI39_RS19610 0.22 +1.1 4,878,534 - ABI39_RS19610 0.24 +0.1 4,878,611 - ABI39_RS19610 0.40 +0.2 4,878,627 - ABI39_RS19610 0.44 -0.8 4,878,654 - ABI39_RS19610 0.49 -0.8 4,878,663 - ABI39_RS19610 0.51 -0.0 4,878,786 - ABI39_RS19610 0.78 +0.6 4,878,793 - ABI39_RS19610 0.79 +0.6 4,878,929 + -2.3 4,878,965 + ABI39_RS19615 0.18 -1.2 4,879,034 + ABI39_RS19615 0.44 -0.6 4,879,403 + ABI39_RS19620 0.19 -0.1 4,879,426 + ABI39_RS19620 0.21 +0.6 4,879,508 + ABI39_RS19620 0.28 -0.4 4,879,508 + ABI39_RS19620 0.28 +0.5 4,879,511 + ABI39_RS19620 0.28 -0.6 4,879,551 + ABI39_RS19620 0.31 +0.4 4,879,553 + ABI39_RS19620 0.31 -0.4 4,879,596 - ABI39_RS19620 0.35 +0.9 4,879,614 + ABI39_RS19620 0.37 -1.5 4,879,693 - ABI39_RS19620 0.43 +0.4 4,879,710 + ABI39_RS19620 0.45 -0.2 4,879,710 + ABI39_RS19620 0.45 +0.4 4,879,797 + ABI39_RS19620 0.52 -0.7 4,879,882 + ABI39_RS19620 0.59 -2.1 4,879,884 + ABI39_RS19620 0.60 +0.6 4,879,884 + ABI39_RS19620 0.60 -0.6 4,879,888 + ABI39_RS19620 0.60 -0.7
Or see this region's nucleotide sequence