Experiment: Fructose-6-phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABI39_RS19580 and ABI39_RS19585 are separated by 90 nucleotides ABI39_RS19585 and ABI39_RS19590 are separated by 185 nucleotides ABI39_RS19590 and ABI39_RS19595 are separated by 37 nucleotides ABI39_RS19595 and ABI39_RS19600 overlap by 4 nucleotides
ABI39_RS19580: ABI39_RS19580 - hypothetical protein, at 4,875,059 to 4,875,352
_RS19580
ABI39_RS19585: ABI39_RS19585 - hypothetical protein, at 4,875,443 to 4,876,108
_RS19585
ABI39_RS19590: ABI39_RS19590 - DUF3127 domain-containing protein, at 4,876,294 to 4,876,692
_RS19590
ABI39_RS19595: ABI39_RS19595 - hypothetical protein, at 4,876,730 to 4,877,293
_RS19595
ABI39_RS19600: ABI39_RS19600 - hypothetical protein, at 4,877,290 to 4,877,997
_RS19600
Position (kb) 4876
4877 Strain fitness (log2 ratio) -1
0
1 at 4875.412 kb on + strand at 4875.424 kb on - strand at 4875.510 kb on + strand, within ABI39_RS19585 at 4875.510 kb on + strand, within ABI39_RS19585 at 4875.512 kb on + strand, within ABI39_RS19585 at 4875.519 kb on + strand, within ABI39_RS19585 at 4875.520 kb on - strand, within ABI39_RS19585 at 4875.520 kb on - strand, within ABI39_RS19585 at 4875.707 kb on + strand, within ABI39_RS19585 at 4875.707 kb on + strand, within ABI39_RS19585 at 4875.881 kb on + strand, within ABI39_RS19585 at 4875.883 kb on + strand, within ABI39_RS19585 at 4875.884 kb on - strand, within ABI39_RS19585 at 4875.931 kb on + strand, within ABI39_RS19585 at 4875.961 kb on - strand, within ABI39_RS19585 at 4875.961 kb on - strand, within ABI39_RS19585 at 4876.023 kb on + strand, within ABI39_RS19585 at 4876.023 kb on + strand, within ABI39_RS19585 at 4876.024 kb on - strand, within ABI39_RS19585 at 4876.096 kb on + strand at 4876.121 kb on - strand at 4876.163 kb on - strand at 4876.237 kb on + strand at 4876.266 kb on - strand at 4876.267 kb on + strand at 4876.268 kb on - strand at 4876.434 kb on + strand, within ABI39_RS19590 at 4876.494 kb on + strand, within ABI39_RS19590 at 4876.759 kb on - strand at 4876.829 kb on + strand, within ABI39_RS19595 at 4876.843 kb on + strand, within ABI39_RS19595 at 4876.844 kb on - strand, within ABI39_RS19595 at 4876.846 kb on - strand, within ABI39_RS19595 at 4876.846 kb on - strand, within ABI39_RS19595 at 4876.888 kb on - strand, within ABI39_RS19595 at 4876.975 kb on + strand, within ABI39_RS19595 at 4877.010 kb on - strand, within ABI39_RS19595 at 4877.045 kb on + strand, within ABI39_RS19595 at 4877.093 kb on - strand, within ABI39_RS19595 at 4877.123 kb on + strand, within ABI39_RS19595 at 4877.134 kb on + strand, within ABI39_RS19595 at 4877.141 kb on - strand, within ABI39_RS19595 at 4877.250 kb on - strand at 4877.268 kb on - strand at 4877.269 kb on + strand at 4877.270 kb on - strand at 4877.274 kb on - strand at 4877.274 kb on - strand at 4877.299 kb on - strand at 4877.299 kb on - strand at 4877.300 kb on + strand at 4877.302 kb on + strand at 4877.565 kb on + strand, within ABI39_RS19600
Per-strain Table
Position Strand Gene LocusTag Fraction Fructose-6-phosphate (C) remove 4,875,412 + -1.0 4,875,424 - +0.1 4,875,510 + ABI39_RS19585 0.10 +0.5 4,875,510 + ABI39_RS19585 0.10 +0.6 4,875,512 + ABI39_RS19585 0.10 -0.6 4,875,519 + ABI39_RS19585 0.11 +1.0 4,875,520 - ABI39_RS19585 0.12 -0.7 4,875,520 - ABI39_RS19585 0.12 +0.2 4,875,707 + ABI39_RS19585 0.40 +0.6 4,875,707 + ABI39_RS19585 0.40 -0.1 4,875,881 + ABI39_RS19585 0.66 -0.4 4,875,883 + ABI39_RS19585 0.66 +0.1 4,875,884 - ABI39_RS19585 0.66 -0.3 4,875,931 + ABI39_RS19585 0.73 +0.1 4,875,961 - ABI39_RS19585 0.78 -1.3 4,875,961 - ABI39_RS19585 0.78 +0.2 4,876,023 + ABI39_RS19585 0.87 +0.9 4,876,023 + ABI39_RS19585 0.87 -0.3 4,876,024 - ABI39_RS19585 0.87 -0.2 4,876,096 + -0.3 4,876,121 - +1.1 4,876,163 - +0.6 4,876,237 + +0.9 4,876,266 - +0.2 4,876,267 + +1.6 4,876,268 - +0.4 4,876,434 + ABI39_RS19590 0.35 +0.2 4,876,494 + ABI39_RS19590 0.50 -1.6 4,876,759 - +1.0 4,876,829 + ABI39_RS19595 0.18 +0.5 4,876,843 + ABI39_RS19595 0.20 +0.5 4,876,844 - ABI39_RS19595 0.20 +0.5 4,876,846 - ABI39_RS19595 0.21 -0.7 4,876,846 - ABI39_RS19595 0.21 -0.0 4,876,888 - ABI39_RS19595 0.28 +0.5 4,876,975 + ABI39_RS19595 0.43 -1.3 4,877,010 - ABI39_RS19595 0.50 -0.2 4,877,045 + ABI39_RS19595 0.56 +0.1 4,877,093 - ABI39_RS19595 0.64 +0.2 4,877,123 + ABI39_RS19595 0.70 -0.1 4,877,134 + ABI39_RS19595 0.72 +0.2 4,877,141 - ABI39_RS19595 0.73 +0.3 4,877,250 - +0.2 4,877,268 - -0.1 4,877,269 + +0.1 4,877,270 - -1.6 4,877,274 - +0.7 4,877,274 - -0.2 4,877,299 - +0.1 4,877,299 - +0.2 4,877,300 + +1.0 4,877,302 + -1.0 4,877,565 + ABI39_RS19600 0.39 +0.2
Or see this region's nucleotide sequence